Jatropha Genome Database
- JcCA0317211.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317211.10 + phase: 0 /partial
(492 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02682 973 0.0
KJC_c06199 84 4e-16
>KJC_c02682
Length = 1155
Score = 973 bits (491), Expect = 0.0
Identities = 491/491 (100%)
Strand = Plus / Minus
Query: 2 ttacggattttggactggcaagattggtcggttctcgtgattctaatgacagttcttttg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ttacggattttggactggcaagattggtcggttctcgtgattctaatgacagttcttttg 693
Query: 62 tcaatggagatttaggggaatttggttatgttgctcctgagtactcaagcactatggttg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 tcaatggagatttaggggaatttggttatgttgctcctgagtactcaagcactatggttg 633
Query: 122 cctcactgaaaggagatatttatagctttgggatagtgcttttggaattagttacaggac 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 cctcactgaaaggagatatttatagctttgggatagtgcttttggaattagttacaggac 573
Query: 182 aaaagccattggaagttagtaatgcagaggaaggattcaaagggaatttggtggactggg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aaaagccattggaagttagtaatgcagaggaaggattcaaagggaatttggtggactggg 513
Query: 242 ttaatcatttagtgagcgcgggtcgaagcaaggatgccattgataaagctctaattggga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ttaatcatttagtgagcgcgggtcgaagcaaggatgccattgataaagctctaattggga 453
Query: 302 aaggtcatgatgatgagattatgcagttcctgaagattggctggagttgtgtggtttcta 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aaggtcatgatgatgagattatgcagttcctgaagattggctggagttgtgtggtttcta 393
Query: 362 ggccaaaggataggccttctatgttccaagtctatgagtccttgaaggtcatggctgaga 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ggccaaaggataggccttctatgttccaagtctatgagtccttgaaggtcatggctgaga 333
Query: 422 aacatggtttctctgaccagtacgaagaattcccattgatctttgataaacaggattctg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aacatggtttctctgaccagtacgaagaattcccattgatctttgataaacaggattctg 273
Query: 482 aatataaagcg 492
|||||||||||
Sbjct: 272 aatataaagcg 262
>KJC_c06199
Length = 611
Score = 83.8 bits (42), Expect = 4e-16
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 40 gattctaatgacagttcttttgtcaatggagatttaggggaatttggttatgttgctcct 99
||||||||||| ||| || ||| || || |||||||| |||||||||||||| || ||
Sbjct: 193 gattctaatgagagtagttatgttaacggggatttaggcgaatttggttatgtagcacca 134
Query: 100 gagtactcaagcactatggttgcctcactgaaaggagatatttatagctttgggatagtg 159
|||||||| |||||||||||||| ||||| ||||| ||| | ||| | ||||| | |||
Sbjct: 133 gagtactcgagcactatggttgcttcacttaaaggggatgtgtatggatttggagttgtg 74
Query: 160 cttttggaattagttacaggacaaaagccattggaagttagtaatgcagaggaaggattc 219
|| ||||| |||| ||||| ||||| ||| | || |||||| ||| || |||||||||
Sbjct: 73 ctattggagctagtgacaggtcaaaaaccacttgacattagtactgctgaagaaggattc 14
Query: 220 aa 221
||
Sbjct: 13 aa 12