Jatropha Genome Database
- JcCA0317171.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317171.10 + phase: 0 /pseudo/partial
(1725 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04022 1031 0.0
KJC_c09293 529 e-150
>KJC_c04022
Length = 528
Score = 1031 bits (520), Expect = 0.0
Identities = 527/528 (99%), Gaps = 1/528 (0%)
Strand = Plus / Minus
Query: 1115 tttgccggaagagcacccctcctgtttgtccttttctgagaagtcatgaatctgaaacgg 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tttgccggaagagcacccctcctgtttgtccttttctgagaagtcatgaatctgaaacgg 468
Query: 1175 ctcaggaccaaaatgatgttgggaatgaattttctgagcaagccaacaatattccacatc 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ctcaggaccaaaatgatgttgggaatgaattttctgagcaagccaacaatattccacatc 408
Query: 1235 taagtgggataaatttattggaagaatcacttggaaaagatgaggatcagcgagattcat 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 taagtgggataaatttattggaagaatcacttggaaaagatgaggatcagcgagattcat 348
Query: 1295 tttctgttgatgaatctgttcatggaaaggagcaatttggtgctaccctggattcagata 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tttctgttgatgaatctgttcatggaaaggagcaatttggtgctaccctggattcagata 288
Query: 1355 agacttttgcacccagatctaggttggaagtgggttatcagggcggacttggtgatatga 1414
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 -gacttttgcacccagatctaggttggaagtgggttatcagggcggacttggtgatatga 229
Query: 1415 aggtggatattgatgcaattcaaatttctaatgataatttgaatccagaatctatatcat 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 aggtggatattgatgcaattcaaatttctaatgataatttgaatccagaatctatatcat 169
Query: 1475 gtaatgaaaatcatatgccaaaagagaaaacaattgagtcacgacatgattctattgtaa 1534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gtaatgaaaatcatatgccaaaagagaaaacaattgagtcacgacatgattctattgtaa 109
Query: 1535 cttcacatgatcaaatgcaatccccatcctgcaatgttgatgtgaatgtgatcgaaactg 1594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 cttcacatgatcaaatgcaatccccatcctgcaatgttgatgtgaatgtgatcgaaactg 49
Query: 1595 aacaagcatcatcagagcacgtcaatgcaacggataacttaaaaacac 1642
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 aacaagcatcatcagagcacgtcaatgcaacggataacttaaaaacac 1
>KJC_c09293
Length = 461
Score = 529 bits (267), Expect = e-150
Identities = 300/306 (98%), Gaps = 5/306 (1%)
Strand = Plus / Minus
Query: 1 gttagagatcttgattcaaacatcaagtgggatgaaattgggaacataaatccgctgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gttagagatcttgattcaaacatcaagtgggatgaaattgggaacataaatccgctgtca 247
Query: 61 cttgtggacaaggaatccaaaaa-tcaatcagactgttcaagaaagtaattgtccgcaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 246 cttgtggacaaggaatccaaaaaatcaatcagactgttcaagaaagtaattgtccgcaga 187
Query: 120 aagtgtgcagaaggagaaggggcaaaatatcttcttgattttggcaagaggagaattat- 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 aagtgtgcagaaggagaaggggcaaaatatcttcttgattttggcaagaggagaattatt 127
Query: 179 cctgaaat-gttc--aagaatggatctatggttgaagaatcctccagtgtgaggaagaaa 235
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 cctgaaattgttacaaagaatggatctatggttgaagaatcctccagtgtgaggaagaaa 67
Query: 236 tattggttgaatgaatcttatgtccctctgtatctcttgaaaagttttgaagagaaacga 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 tattggttgaatgaatcttatgtccctctgtatctcttgaaaagttttgaagagaaacga 7
Query: 296 attgcc 301
||||||
Sbjct: 6 attgcc 1