Jatropha Genome Database
- JcCA0317161.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317161.10 + phase: 0
(1065 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05831 769 0.0
KJC_c02206 650 0.0
KJC_c02807 94 8e-19
KJC_c00215 82 3e-15
KJC_c04815 62 3e-09
KJC_c00598 52 3e-06
>KJC_c05831
Length = 670
Score = 769 bits (388), Expect = 0.0
Identities = 409/412 (99%), Gaps = 3/412 (0%)
Strand = Plus / Plus
Query: 1 atgtctataccaaaagaacatgattacataggcttatcagagacttcttctcctatggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atgtctataccaaaagaacatgattacataggcttatcagagacttcttctcctatggaa 319
Query: 61 agaatctctgataagctttcatcctcttcttcttcttcctctactctatcaactgaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agaatctctgataagctttcatcctcttcttcttcttcctctactctatcaactgaagag 379
Query: 121 aacagcaacaaaa-acaaaacttctctcaaccttaaagaaactgagctgaggcttggttt 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aacagcaacaaaaaacaaaacttctctcaaccttaaagaaactgagctgaggcttggttt 439
Query: 180 gcctgggtcacagtcccctgaaagaaaaccactgactggggtctctctttttggaaaaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcctgggtcacagtcccctgaaagaaaaccactgactggggtctctctttttggaaaaga 499
Query: 240 tattgaaaccaacaataatgggtactctcttagctcattaaagaatttggtctcaggggc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tattgaaaccaacaataatgggtactctcttagctcattaaagaatttggtctcaggggc 559
Query: 300 taagagaggtttctcagatgccattgatagctcctctggaaaatgggttttctctgtcaa 359
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 560 taagagaggtttctcagatgccattgatagctcctctggaaaatggg-tttctctgtcaa 618
Query: 360 taatggatctgagactgatttgagtaaaggag-ctgtcttgttttctcctag 410
|||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 619 taatggatctgagactgatttgagtaaaggagtctgtcttgttttctcctag 670
>KJC_c02206
Length = 817
Score = 650 bits (328), Expect = 0.0
Identities = 335/336 (99%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 456 caagaaagaggttgttggtgttattgctcaatctccaaagccagttcaagggaagagcag 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 caagaaagaggttgttggtgttattgctcaatctccaaagccagttcaagggaagagcag 758
Query: 516 tgaagtctctggtgcaaatgagaacagtaatgctcctgctgctaaggcacaggtggtggg 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 tgaagtctctggtgcaaatgagaacagtaatgctcctgctgctaaggcacaggtggtggg 698
Query: 576 gtggccacctatccgttcttttcgaaagaacacgatggtctctaatttggcaaagaacac 635
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gtggccacctatccgt-cttttcgaaagaacacgatggtctctaatttggcaaagaacac 639
Query: 636 tgaagatgctgaaggcaaatcaggatttgggtgcctctatgtaaaagttagcatggatgg 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tgaagatgctgaaggcaaatcaggatttgggtgcctctatgtaaaagttagcatggatgg 579
Query: 696 tgcaccataccttaggaaggttgatctcaaaacctacagcaactatgtggaactctcatc 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tgcaccataccttaggaaggttgatctcaaaacctacagcaactatgtggaactctcatc 519
Query: 756 tgctcttgagaagatgttcagttgctttactattgg 791
||||||||||||||||||||||||||||||||||||
Sbjct: 518 tgctcttgagaagatgttcagttgctttactattgg 483
Score = 476 bits (240), Expect = e-134
Identities = 240/240 (100%)
Strand = Plus / Minus
Query: 826 ggacaatgcggctcaggatttccagggcgagatggcctgagcgagacttgtttaaaagat 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ggacaatgcggctcaggatttccagggcgagatggcctgagcgagacttgtttaaaagat 425
Query: 886 cttctccatggctctgaatatgttctcacatatgaagataaggacggtgactggatgctt 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cttctccatggctctgaatatgttctcacatatgaagataaggacggtgactggatgctt 365
Query: 946 gtcggcgatgtgccctgggagatgtttacggacacatgcaggagattgaggatcatgaaa 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gtcggcgatgtgccctgggagatgtttacggacacatgcaggagattgaggatcatgaaa 305
Query: 1006 ggttcagaggctattgggcttgctccaagggccatggagaaatgtaagaatcgtaattag 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ggttcagaggctattgggcttgctccaagggccatggagaaatgtaagaatcgtaattag 245
>KJC_c02807
Length = 794
Score = 93.7 bits (47), Expect = 8e-19
Identities = 131/159 (82%)
Strand = Plus / Plus
Query: 896 gctctgaatatgttctcacatatgaagataaggacggtgactggatgcttgtcggcgatg 955
||||||||||||| | || |||||||||||||| |||||||||||||| || |||||||
Sbjct: 434 gctctgaatatgtgccaacctatgaagataaggatggtgactggatgctcgtgggcgatg 493
Query: 956 tgccctgggagatgtttacggacacatgcaggagattgaggatcatgaaaggttcagagg 1015
| || |||||||||||| || |||||| | | ||| | || |||||||| || || |
Sbjct: 494 ttccatgggagatgtttgttgattcatgcaagcgcttgcgcattatgaaaggatctgaag 553
Query: 1016 ctattgggcttgctccaagggccatggagaaatgtaaga 1054
||||||| ||||| ||||| || ||||||||||| ||||
Sbjct: 554 ctattggtcttgcaccaagagctatggagaaatgcaaga 592
>KJC_c00215
Length = 1768
Score = 81.8 bits (41), Expect = 3e-15
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 883 gatcttctccatggctctgaatatgttctcacatatgaagataaggacggtgactggatg 942
||||| || |||||||| ||||||||||| |||||||| ||||| || ||||| ||||||
Sbjct: 1197 gatctgcttcatggctcagaatatgttcttacatatgaggataaagatggtgattggatg 1256
Query: 943 cttgtcggcgatgtgccctgggagatgtt 971
||||| || ||||| || |||||||||||
Sbjct: 1257 cttgttggtgatgttccatgggagatgtt 1285
>KJC_c04815
Length = 845
Score = 61.9 bits (31), Expect = 3e-09
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 883 gatcttctccatggctctgaatatgttctcacatatgaagataaggacggtgactggatg 942
|||||||| |||| || || ||||| || ||||| || |||||||| || || ||||||
Sbjct: 630 gatcttctgaatggatcagagtatgtgctaacatacgaggataaggatggcgattggatg 689
Query: 943 cttgtcggcgatgtgccctgggagatgttta 973
||||| || |||||||| |||||||||||||
Sbjct: 690 cttgttggggatgtgccatgggagatgttta 720
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 745 gaactctcatctgctcttgagaagatgttcagttgctttac 785
|||||||| | |||||||||||||||||||||||| |||||
Sbjct: 525 gaactctcttgtgctcttgagaagatgttcagttgttttac 565
>KJC_c00598
Length = 889
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 916 tatgaagataaggacggtgactggatgcttgtcggcgatgtgccctgggagatgttta 973
|||||||| || || || |||||||||||||| || |||||||| ||||| |||||||
Sbjct: 180 tatgaagacaaagatggagactggatgcttgtaggagatgtgccttgggaaatgttta 123