Jatropha Genome Database
- JcCA0317001.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317001.20 - phase: 0
(648 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01544 1011 0.0
KJC_s18862 658 0.0
>KJC_c01544
Length = 747
Score = 1011 bits (510), Expect = 0.0
Identities = 510/510 (100%)
Strand = Plus / Minus
Query: 139 aattggtctaaggctcaaaaactctctttctttcctaaacttcaaagaatcggacataaa 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aattggtctaaggctcaaaaactctctttctttcctaaacttcaaagaatcggacataaa 483
Query: 199 gctaaagctatgccacaagaatctgaagtcagtttagctgcagatgcctttactcatttc 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gctaaagctatgccacaagaatctgaagtcagtttagctgcagatgcctttactcatttc 423
Query: 259 aagcatctgcttctgccaatcacagacaggaatccttatctttctgagggcacaagacag 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aagcatctgcttctgccaatcacagacaggaatccttatctttctgagggcacaagacag 363
Query: 319 gctgctgctacagctgctgcattggctaagaaatatggggctgacatcactgttgtggtt 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gctgctgctacagctgctgcattggctaagaaatatggggctgacatcactgttgtggtt 303
Query: 379 attgatgaaaaggagagagagtcattgccagagcatgaaactcaaatgtctagcattcgc 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 attgatgaaaaggagagagagtcattgccagagcatgaaactcaaatgtctagcattcgc 243
Query: 439 tggcatctatctgaaggtggattccaggaattcaagttattggagcggctcggcgaaggg 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tggcatctatctgaaggtggattccaggaattcaagttattggagcggctcggcgaaggg 183
Query: 499 aacaagcccacagccatcattggtgatgttgctgatgaactgaacttagatttggtagtc 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aacaagcccacagccatcattggtgatgttgctgatgaactgaacttagatttggtagtc 123
Query: 559 ataagcatggaggcaattcattccaagcatgtggatgctaacttattggctgagttcatc 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ataagcatggaggcaattcattccaagcatgtggatgctaacttattggctgagttcatc 63
Query: 619 ccttgccctgtcttgcttttaccgttataa 648
||||||||||||||||||||||||||||||
Sbjct: 62 ccttgccctgtcttgcttttaccgttataa 33
Score = 157 bits (79), Expect = 4e-38
Identities = 79/79 (100%)
Strand = Plus / Minus
Query: 1 atggcgtttgctcagtacttgctagctgttcccgttgagacttcaactcatccaaaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atggcgtttgctcagtacttgctagctgttcccgttgagacttcaactcatccaaaaatc 621
Query: 61 acgatcctcaactctaccg 79
|||||||||||||||||||
Sbjct: 620 acgatcctcaactctaccg 602
>KJC_s18862
Length = 487
Score = 658 bits (332), Expect = 0.0
Identities = 332/332 (100%)
Strand = Plus / Minus
Query: 317 aggctgctgctacagctgctgcattggctaagaaatatggggctgacatcactgttgtgg 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggctgctgctacagctgctgcattggctaagaaatatggggctgacatcactgttgtgg 302
Query: 377 ttattgatgaaaaggagagagagtcattgccagagcatgaaactcaaatgtctagcattc 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttattgatgaaaaggagagagagtcattgccagagcatgaaactcaaatgtctagcattc 242
Query: 437 gctggcatctatctgaaggtggattccaggaattcaagttattggagcggctcggcgaag 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctggcatctatctgaaggtggattccaggaattcaagttattggagcggctcggcgaag 182
Query: 497 ggaacaagcccacagccatcattggtgatgttgctgatgaactgaacttagatttggtag 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggaacaagcccacagccatcattggtgatgttgctgatgaactgaacttagatttggtag 122
Query: 557 tcataagcatggaggcaattcattccaagcatgtggatgctaacttattggctgagttca 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcataagcatggaggcaattcattccaagcatgtggatgctaacttattggctgagttca 62
Query: 617 tcccttgccctgtcttgcttttaccgttataa 648
||||||||||||||||||||||||||||||||
Sbjct: 61 tcccttgccctgtcttgcttttaccgttataa 30
Score = 121 bits (61), Expect = 2e-27
Identities = 61/61 (100%)
Strand = Plus / Minus
Query: 139 aattggtctaaggctcaaaaactctctttctttcctaaacttcaaagaatcggacataaa 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aattggtctaaggctcaaaaactctctttctttcctaaacttcaaagaatcggacataaa 361
Query: 199 g 199
|
Sbjct: 360 g 360