Jatropha Genome Database
- JcCA0316711.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0316711.10 + phase: 0 /partial
(1651 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c10045 1150 0.0
KJC_c06773 404 e-112
>KJC_c10045
Length = 594
Score = 1150 bits (580), Expect = 0.0
Identities = 594/596 (99%), Gaps = 2/596 (0%)
Strand = Plus / Minus
Query: 28 ggcaaagctgctgcggctgcagctgcccgccgccaatggaaggtgggcgatctcgttctt 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ggcaaagctgctgcggctgcagctgcccgccgccaatggaaggtgggcgatctcgttctt 535
Query: 88 gctaaagtcaaaggctttcctgcttggcctgccacggtaagtgagccagagaagtggggc 147
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 534 gctaaagtcaaaggctttcctgcttggcctgccacggtaagtgagccagagaa-tggggc 476
Query: 148 tactcagccgattggaagaaagtacttgtctacttctttggaacgcagcaaatagccttc 207
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 475 tactcagccgattggaagaaagtacttgtctact-ctttggaacgcagcaaatagccttc 417
Query: 208 tgcaatcctgctgacgttgaagcatttactgaagagaagaaacaatctcttttggtcaaa 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tgcaatcctgctgacgttgaagcatttactgaagagaagaaacaatctcttttggtcaaa 357
Query: 268 cgtcaaggaaaaggtgcagattttgttcgtgcagtgcaggagattatcgacagttatgag 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cgtcaaggaaaaggtgcagattttgttcgtgcagtgcaggagattatcgacagttatgag 297
Query: 328 aagtcaaagaaaacaaaccaagctgatgatctcaattctggagaagaagttactctcgca 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 aagtcaaagaaaacaaaccaagctgatgatctcaattctggagaagaagttactctcgca 237
Query: 388 aatggtgggaattcaatggagtcgtcggctgattttgagtcaaagggtcggactgaaact 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 aatggtgggaattcaatggagtcgtcggctgattttgagtcaaagggtcggactgaaact 177
Query: 448 tctgaagcaactgttacaggtagaaatgatccttctcttggaagcagcgttgctcctgat 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tctgaagcaactgttacaggtagaaatgatccttctcttggaagcagcgttgctcctgat 117
Query: 508 gtctcaaaaatcggttctctgcttgataaagaggccttattagagcagcccactgataat 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 gtctcaaaaatcggttctctgcttgataaagaggccttattagagcagcccactgataat 57
Query: 568 gtcgtggtcacagcaaaacctgttataactacatatacttcaagaaagagatctgg 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 gtcgtggtcacagcaaaacctgttataactacatatacttcaagaaagagatctgg 1
>KJC_c06773
Length = 693
Score = 404 bits (204), Expect = e-112
Identities = 204/204 (100%)
Strand = Plus / Plus
Query: 1448 gctctgctgataaaggcttgttttctgtgaagggagcagtggataatgcatcaacccaaa 1507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctctgctgataaaggcttgttttctgtgaagggagcagtggataatgcatcaacccaaa 60
Query: 1508 aggtctttgttcaaattccggcaaataggtcccagctgtcaatagttaaggagaatcagt 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggtctttgttcaaattccggcaaataggtcccagctgtcaatagttaaggagaatcagt 120
Query: 1568 cttttggctgctcagcagatggtgaagctgctttgcctccttccaaacgtcttcatcgtg 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttttggctgctcagcagatggtgaagctgctttgcctccttccaaacgtcttcatcgtg 180
Query: 1628 ctctagaagccatgtcagcaaatg 1651
||||||||||||||||||||||||
Sbjct: 181 ctctagaagccatgtcagcaaatg 204