Jatropha Genome Database
- JcCA0315941.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0315941.10 - phase: 0
(1035 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00160 2052 0.0
KJC_s15248 456 e-128
KJC_c12975 159 2e-38
KJC_c06411 141 4e-33
KJC_s14897 86 2e-16
>KJC_c00160
Length = 1638
Score = 2052 bits (1035), Expect = 0.0
Identities = 1035/1035 (100%)
Strand = Plus / Plus
Query: 1 atggctggtagtaatgaagtcaacctcaatgaatccaagagggttgtgccactaaacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atggctggtagtaatgaagtcaacctcaatgaatccaagagggttgtgccactaaacaca 360
Query: 61 tgggtcctcatttcaaatttcaagctagcatataatctccttcgccgcccggatgggagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgggtcctcatttcaaatttcaagctagcatataatctccttcgccgcccggatgggagc 420
Query: 121 tttaatcgtgatttggcagagtttcttgaccggaaagtcaatgccaacaccattccggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttaatcgtgatttggcagagtttcttgaccggaaagtcaatgccaacaccattccggtt 480
Query: 181 gatggagttttctcctttgatcatgtagacagagccacaggcctccttaaccggatttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatggagttttctcctttgatcatgtagacagagccacaggcctccttaaccggatttac 540
Query: 241 caacctgcccctgaaaatgaggctcagtggggcattgtagagcttgaaaagcctttgagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caacctgcccctgaaaatgaggctcagtggggcattgtagagcttgaaaagcctttgagc 600
Query: 301 acaactgagattgtcccagttataatcttcttccatggtggaagcttcactcactcctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acaactgagattgtcccagttataatcttcttccatggtggaagcttcactcactcctct 660
Query: 361 gccaatagtgctatctacgacaccttttgtcgccgccttgtgaatgtttgcaaagctgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gccaatagtgctatctacgacaccttttgtcgccgccttgtgaatgtttgcaaagctgtt 720
Query: 421 gtagtatctgttaattatcgccggtcacctgaatatcgctacccatgtgcatatgatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtagtatctgttaattatcgccggtcacctgaatatcgctacccatgtgcatatgatgat 780
Query: 481 ggttgggcagcttttaagtgggttaaatcaagaacttggcttcaaagtgggaaggattcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ggttgggcagcttttaagtgggttaaatcaagaacttggcttcaaagtgggaaggattcg 840
Query: 541 aaagttcatgtatatttggcaggggatagttcaggtggtaatatagctcaccatgttgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aaagttcatgtatatttggcaggggatagttcaggtggtaatatagctcaccatgttgca 900
Query: 601 gttagagcagcagaagcagaaattgaggtattgggtaatattcttcttcatccaatgttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gttagagcagcagaagcagaaattgaggtattgggtaatattcttcttcatccaatgttt 960
Query: 661 ggcgggcaaatgagaactgaatcggagcaaagattagatggaaaatattttgttacaact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggcgggcaaatgagaactgaatcggagcaaagattagatggaaaatattttgttacaact 1020
Query: 721 caagaccgcgattggtattggagagcatatctacccgaaggggaagatagagaccatcca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 caagaccgcgattggtattggagagcatatctacccgaaggggaagatagagaccatcca 1080
Query: 781 gcgtgcaatatatttggtccaagagggaaaaaccttgaaggaattaattttcctaaaagt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gcgtgcaatatatttggtccaagagggaaaaaccttgaaggaattaattttcctaaaagt 1140
Query: 841 ctagttgttgtggctggtttggatcttgttcaagattggcaattagcttatgttgaaggg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ctagttgttgtggctggtttggatcttgttcaagattggcaattagcttatgttgaaggg 1200
Query: 901 ctccagaaagctggccatgaagtgaaacttctttatctaaggcaagctacaataggtttc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ctccagaaagctggccatgaagtgaaacttctttatctaaggcaagctacaataggtttc 1260
Query: 961 tactttttaccaaataatgatcacttctattgcctaatggaggaaattaaagcctttgtt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 tactttttaccaaataatgatcacttctattgcctaatggaggaaattaaagcctttgtt 1320
Query: 1021 aatcctaactgttaa 1035
|||||||||||||||
Sbjct: 1321 aatcctaactgttaa 1335
>KJC_s15248
Length = 555
Score = 456 bits (230), Expect = e-128
Identities = 230/230 (100%)
Strand = Plus / Minus
Query: 297 gagcacaactgagattgtcccagttataatcttcttccatggtggaagcttcactcactc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gagcacaactgagattgtcccagttataatcttcttccatggtggaagcttcactcactc 495
Query: 357 ctctgccaatagtgctatctacgacaccttttgtcgccgccttgtgaatgtttgcaaagc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ctctgccaatagtgctatctacgacaccttttgtcgccgccttgtgaatgtttgcaaagc 435
Query: 417 tgttgtagtatctgttaattatcgccggtcacctgaatatcgctacccatgtgcatatga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tgttgtagtatctgttaattatcgccggtcacctgaatatcgctacccatgtgcatatga 375
Query: 477 tgatggttgggcagcttttaagtgggttaaatcaagaacttggcttcaaa 526
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tgatggttgggcagcttttaagtgggttaaatcaagaacttggcttcaaa 325
>KJC_c12975
Length = 707
Score = 159 bits (80), Expect = 2e-38
Identities = 326/408 (79%)
Strand = Plus / Minus
Query: 305 ctgagattgtcccagttataatcttcttccatggtggaagcttcactcactcctctgcca 364
||||||||||||| || || ||||||| ||||| |||||||| | || || ||||| |
Sbjct: 426 ctgagattgtccctgtcattctcttctttcatggcggaagctttgcacattcttctgcta 367
Query: 365 atagtgctatctacgacaccttttgtcgccgccttgtgaatgtttgcaaagctgttgtag 424
| |||||||| || ||||| |||||||||| || ||| ||||||| ||||| || |
Sbjct: 366 acagtgctatatatgacacgctttgtcgccgactggtgggcatttgcaaggctgtggtgg 307
Query: 425 tatctgttaattatcgccggtcacctgaatatcgctacccatgtgcatatgatgatggtt 484
| ||||| ||||| | || | |||||| |||| || || ||||| || |||||||| |
Sbjct: 306 tctctgtgaattacaggcgtgcgcctgaaaatcgatatccttgtgcgtacgatgatggat 247
Query: 485 gggcagcttttaagtgggttaaatcaagaacttggcttcaaagtgggaaggattcgaaag 544
|| ||||| ||||||||||||| |||||||| |||||| | ||| ||| ||||||||||
Sbjct: 246 ggacagctcttaagtgggttaactcaagaacatggcttgagagtaagaaagattcgaaag 187
Query: 545 ttcatgtatatttggcaggggatagttcaggtggtaatatagctcaccatgttgcagtta 604
||||| ||| ||||||||||||||| || |||||||| || | ||||||||||| | |
Sbjct: 186 ttcatatatttttggcaggggatagctctggtggtaacattgtacaccatgttgctttaa 127
Query: 605 gagcagcagaagcagaaattgaggtattgggtaatattcttcttcatccaatgtttggcg 664
|||||| || ||| |||||| ||||||||||| || | || | ||||||||||| |
Sbjct: 126 gagcagtggagtcaggaattgaagtattgggtaacatattgctcaacccaatgtttggtg 67
Query: 665 ggcaaatgagaactgaatcggagcaaagattagatggaaaatattttg 712
||||| |||||| ||||| ||| | |||||||||||||||||||||
Sbjct: 66 ggcaagagagaacagaatcagagaagcgattagatggaaaatattttg 19
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 121 tttaatcgtgatttggcagagtttcttgaccggaaagt 158
||||||||| | ||||||||||| ||||||||||||||
Sbjct: 610 tttaatcgtcacttggcagagttccttgaccggaaagt 573
>KJC_c06411
Length = 583
Score = 141 bits (71), Expect = 4e-33
Identities = 239/295 (81%)
Strand = Plus / Plus
Query: 692 gattagatggaaaatattttgttacaactcaagaccgcgattggtattggagagcatatc 751
|||||||||||||||||||||| || || ||||| || |||||||||||||| | ||
Sbjct: 31 gattagatggaaaatattttgtcactctccaggaccgggactggtattggagagcttttc 90
Query: 752 tacccgaaggggaagatagagaccatccagcgtgcaatatatttggtccaagagggaaaa 811
| || ||||| | ||| || || |||||||| || ||| ||||||||||| ||| ||||
Sbjct: 91 tccctgaaggagcagacagggatcatccagcatgtaatccatttggtccaaaaggtaaaa 150
Query: 812 accttgaaggaattaattttcctaaaagtctagttgttgtggctggtttggatcttgttc 871
|||||||||| | || || || || | ||| ||||| |||||||||||||| ||| |||
Sbjct: 151 gccttgaaggagtgaaattccccaagaatcttgttgtggtggctggtttggaccttattc 210
Query: 872 aagattggcaattagcttatgttgaagggctccagaaagctggccatgaagtgaaacttc 931
|||| |||||||| |||||||||||||| || |||| ||||| || | ||||||||||
Sbjct: 211 aagactggcaattggcttatgttgaaggacttaagaaggctggtcaagttgtgaaacttc 270
Query: 932 tttatctaaggcaagctacaataggtttctactttttaccaaataatgatcactt 986
| ||||| |||||| ||||| || |||||||| || || |||||| |||||||
Sbjct: 271 tgtatcttgagcaagcaacaattggcttctacttgttgcccaataataatcactt 325
>KJC_s14897
Length = 71
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 270 gggcattgtagagcttgaaaagcctttgagcacaactgagatt 312
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggcattgtagagcttgaaaagcctttgagcacaactgagatt 43