Jatropha Genome Database
- JcCA0315831.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0315831.10 - phase: 0 /pseudo
(2661 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c07185 924 0.0
KJC_c11804 88 1e-16
>KJC_c07185
Length = 807
Score = 924 bits (466), Expect = 0.0
Identities = 480/482 (99%), Gaps = 2/482 (0%)
Strand = Plus / Minus
Query: 1309 gtgatagcaattgcaatttcagtgggagttggtctacatgcaatttctcatttaacatgt 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gtgatagcaattgcaatttcagtgggagttggtctacatgcaatttctcatttaacatgt 615
Query: 1369 gacttccctcgacttcttcaagcaagtgaagaaaaatggaagcttatgcagaaatatttt 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gacttccctcgacttcttcaagcaagtgaagaaaaatggaagcttatgcagaaatatttt 555
Query: 1429 ggggaccaaccttcaagctattggcattttgtcaagtcagtagagggagtaactggaatt 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ggggaccaaccttcaagctattggcattttgtcaagtcagtagagggagtaactggaatt 495
Query: 1489 ataatggtagttttgatggcaatagcttttacattagctgctccttggtttagaagaaac 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 494 ataatggtagttttgatggcaatagcttttacattagctgctccttggtttag-agaaac 436
Query: 1549 aagctcaatttgccaactttcctaaagaagcttactggttttaatgccttctggtactct 1608
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 435 aagctcaatttgccaactttcct-aagaagcttactggttttaatgccttctggtactct 377
Query: 1609 caccatctctttgtcatagtctataccctactcattgttcatggccaatacctctacttg 1668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 caccatctctttgtcatagtctataccctactcattgttcatggccaatacctctacttg 317
Query: 1669 actaaagaatggtacaagaaaacgacctggatgtatttagctgttccagtaattctttat 1728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 actaaagaatggtacaagaaaacgacctggatgtatttagctgttccagtaattctttat 257
Query: 1729 gcaagtgaaagattgaccagggcattaaggtctagcatcaagcctgttactataaaaaag 1788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gcaagtgaaagattgaccagggcattaaggtctagcatcaagcctgttactataaaaaag 197
Query: 1789 gt 1790
||
Sbjct: 196 gt 195
Score = 394 bits (199), Expect = e-109
Identities = 199/199 (100%)
Strand = Plus / Minus
Query: 1873 aaggtggctatttaccctggaaatgtgttggcacttcacatgtcaaagcctcaaggattc 1932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aaggtggctatttaccctggaaatgtgttggcacttcacatgtcaaagcctcaaggattc 140
Query: 1933 aaatacaagagtggacagtacatgttcgtcaattgtgccgccgtctctccatttgaatgg 1992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 aaatacaagagtggacagtacatgttcgtcaattgtgccgccgtctctccatttgaatgg 80
Query: 1993 cacccattttccatcacttcagctcctggagatgattatctaagtgttcacattagaact 2052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 cacccattttccatcacttcagctcctggagatgattatctaagtgttcacattagaact 20
Query: 2053 ttgggtgattggacaaggc 2071
|||||||||||||||||||
Sbjct: 19 ttgggtgattggacaaggc 1
Score = 89.7 bits (45), Expect = 3e-17
Identities = 45/45 (100%)
Strand = Plus / Minus
Query: 1264 aggagctgagacactcaaattgaatatggctttaattttattacc 1308
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 aggagctgagacactcaaattgaatatggctttaattttattacc 763
>KJC_c11804
Length = 565
Score = 87.7 bits (44), Expect = 1e-16
Identities = 143/176 (81%)
Strand = Plus / Minus
Query: 673 tttgattccaggcttcagaccttttttgacatggttgataaagatgcagatggtagaatc 732
|||||| | ||||||||||| || ||||||||||| || ||| |||||||||| || |||
Sbjct: 360 tttgatgctaggcttcagactttctttgacatggtggacaaaaatgcagatggaaggatc 301
Query: 733 acagaagaagaagttagagagatcattactcttagtgcttctgcaaataaactatcaaat 792
||||| || ||||| |||||| ||| || | |||||||| || ||||| |||||||
Sbjct: 300 acagaggaggaagtgctagagattattgctttgagtgcttcagctaataagttatcaaag 241
Query: 793 atccaaaaacaagcagaggaatatgcagccttgatcatggaagagctggatccaga 848
|| ||| | | |||||||||||||| || ||||||||||||| || ||||||||
Sbjct: 240 attcaagaccgtgcagaggaatatgctgctctgatcatggaagaactagatccaga 185