Jatropha Genome Database

JcCA0314481.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0314481.10 + phase: 0 
         (1068 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10984                                                            260   6e-69

>KJC_c10984 
          Length = 294

 Score =  260 bits (131), Expect = 6e-69
 Identities = 154/158 (97%), Gaps = 3/158 (1%)
 Strand = Plus / Minus

                                                                        
Query: 911  atgccattgaatgtgctgaagctggaattaaggttctactttttgattatgagaactcat 970
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 294  atgccattgaatgtgctgaagctggaattaaggttctactttt-gattatgagaactcat 236

                                                                        
Query: 971  atccttggtgcaagaccgatttggttcgtcatcccctggtcactaaagttcataactggg 1030
            | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 235  anccttggtgcaagaccgatt-ggttcgtcatcccctggtcactaaagttcataactggg 177

                                                  
Query: 1031 aacaagtggagcaacagttaatttcgtggatttcttag 1068
            ||||||||||||||||||||| ||||||||||||||||
Sbjct: 176  aacaagtggagcaacagttaa-ttcgtggatttcttag 140