Jatropha Genome Database
- JcCA0313841.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0313841.10 + phase: 2 /partial
(808 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c09699 1126 0.0
>KJC_c09699
Length = 658
Score = 1126 bits (568), Expect = 0.0
Identities = 582/584 (99%), Gaps = 2/584 (0%)
Strand = Plus / Minus
Query: 227 gttttcaagg-agagaatgctgggttctggagataataagcctcgcccac-ataagagag 284
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 658 gttttcaaggtagagaatgctgggttctggagataataagcctcgcccaccataagagag 599
Query: 285 ctttactctttgtggacaactcaggtgctgacattgtcctggggatgcttccccttgcaa 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ctttactctttgtggacaactcaggtgctgacattgtcctggggatgcttccccttgcaa 539
Query: 345 gggaactcctccgacgtggaactgaggtggttttggtagcaaactcccttccagcattaa 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gggaactcctccgacgtggaactgaggtggttttggtagcaaactcccttccagcattaa 479
Query: 405 atgatgtgactgctatggagctccctgagattgtcgctgaggctgcaaaacattgtgaca 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 atgatgtgactgctatggagctccctgagattgtcgctgaggctgcaaaacattgtgaca 419
Query: 465 ttcttcgcagagctgctgaagcaggaggtctacttgtggatgcaatgattaacactttag 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ttcttcgcagagctgctgaagcaggaggtctacttgtggatgcaatgattaacactttag 359
Query: 525 acagttcaaaagagaattctgcttcagttcccctgatggttgttgagaatggatgtggga 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 acagttcaaaagagaattctgcttcagttcccctgatggttgttgagaatggatgtggga 299
Query: 585 gtccatgcattgatttcagacaggtcagctctgagcttgctgctgccgcaaaggatgccg 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gtccatgcattgatttcagacaggtcagctctgagcttgctgctgccgcaaaggatgccg 239
Query: 645 atttgattatattggaagggatggggagagctctgcacaccaacttcaatgctcagttta 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 atttgattatattggaagggatggggagagctctgcacaccaacttcaatgctcagttta 179
Query: 705 aatgtgatgttttgaagctggcgatggtgaagaatcagaggttggcggagaaattaatta 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 aatgtgatgttttgaagctggcgatggtgaagaatcagaggttggcggagaaattaatta 119
Query: 765 aaggaaagatatatgactgtgtttgcagatatgaaccagctagc 808
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 aaggaaagatatatgactgtgtttgcagatatgaaccagctagc 75