Jatropha Genome Database
- JcCA0313461.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0313461.10 + phase: 0
(621 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_s15279 78 3e-14
KJC_c00209 78 3e-14
KJC_c12907 76 1e-13
KJC_c04074 70 7e-12
KJC_c11097 56 1e-07
>KJC_s15279
Length = 453
Score = 77.8 bits (39), Expect = 3e-14
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 49 aaatgtgtgacagttggagatggagcagttggaaagacctgccttcttatctcctacact 108
||||| || |||||||| ||||| || ||||| ||||| ||| | || |||||||||||
Sbjct: 96 aaatgcgtcacagttggtgatggtgctgttggcaagacttgcatgctcatctcctacacc 155
Query: 109 agcaacaccttccccacagattatgttcctactgtttttgataacttcagtgccaatgt 167
|||||||| || || || || ||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 156 agcaacacttttcctactgactatgtgcctactgtgtttgacaacttcagtgcgaatgt 214
>KJC_c00209
Length = 1134
Score = 77.8 bits (39), Expect = 3e-14
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 49 aaatgtgtgacagttggagatggagcagttggaaagacctgccttcttatctcctacact 108
||||| || |||||||| ||||| || ||||| ||||| ||| | || |||||||||||
Sbjct: 184 aaatgcgtcacagttggtgatggtgctgttggcaagacttgcatgctcatctcctacacc 243
Query: 109 agcaacaccttccccacagattatgttcctactgtttttgataacttcagtgccaatgt 167
|||||||| || || || || ||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 244 agcaacacttttcctactgactatgtgcctactgtgtttgacaacttcagtgcgaatgt 302
>KJC_c12907
Length = 662
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 79 ggaaagacctgccttcttatctcctacactagcaacaccttccccacagattatgttcct 138
|||||||||||| | ||||| |||||||| |||||||||||||| || |||||||| ||
Sbjct: 160 ggaaagacctgcatgcttatttcctacaccagcaacaccttccctacggattatgtaccc 101
Query: 139 actgtttttg 148
||||||||||
Sbjct: 100 actgtttttg 91
>KJC_c04074
Length = 506
Score = 69.9 bits (35), Expect = 7e-12
Identities = 72/83 (86%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 79 ggaaagacctgccttcttatctcc-tacactagcaacaccttccccacagattatgttcc 137
|||||||||||| | ||||| ||| ||||| |||||||||||||| || |||||||| ||
Sbjct: 394 ggaaagacctgcatgcttatttccctacaccagcaacaccttccctacggattatgtacc 453
Query: 138 tactgtttttgataacttcagtg 160
||||||||||| || |||||||
Sbjct: 454 aactgtttttgacaatttcagtg 476
>KJC_c11097
Length = 519
Score = 56.0 bits (28), Expect = 1e-07
Identities = 148/188 (78%)
Strand = Plus / Plus
Query: 103 tacactagcaacaccttccccacagattatgttcctactgtttttgataacttcagtgcc 162
||||| |||||||| || || || ||||| || || ||||||||||| || ||||||||
Sbjct: 285 tacaccagcaacacttttcctacggattacgtgccaactgtttttgacaatttcagtgca 344
Query: 163 aatgttatggttgatgggaagactgtgaatctgggtctttgggacactgctggtcaagag 222
||||| | || |||| | ||||| || ||||| | ||||| |||||||| ||||||
Sbjct: 345 aatgtagttgtcaatggaagcactgttaacctgggattgtgggatactgctgggcaagag 404
Query: 223 gattacaacaggctaaggcccctaagttatagaggagcagacgttttcattcttgccttt 282
||||| || ||| |||| || | |||||| | ||||| || |||||||| || |||||
Sbjct: 405 gattataataggttaagacctttgagttatcgtggagctgatgttttcatactggccttc 464
Query: 283 tctctcat 290
||||||||
Sbjct: 465 tctctcat 472