Jatropha Genome Database
- JcCA0312771.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0312771.10 + phase: 0 /pseudo
(2211 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05044 1645 0.0
KJC_c08845 1039 0.0
>KJC_c05044
Length = 1193
Score = 1645 bits (830), Expect = 0.0
Identities = 865/870 (99%), Gaps = 5/870 (0%)
Strand = Plus / Minus
Query: 195 ccggcgcccgagccagaagccgagttcctgggctaagagttcggcttcgatgtacagtac 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1193 ccggcgcccgagccagaagccgagttcctgggctaagagttcggcttcgatgtacagtac 1134
Query: 255 catcgccggagaaatctttggggataactataagagttcgctcacaatcggattgatctc 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 catcgccggagaaatctttggggataactataagagttcgctcacaatcggattgatctc 1074
Query: 315 gctgatgaattcaactgccggtgtttcaaattcatcgtgcactggcgttcttggcatttc 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 gctgatgaattcaactgccggtgtttcaaattcatcgtgcactggcgttcttggcatttc 1014
Query: 375 accatttaaagctgcttcgatccttccctttttgcagggatccaggtggcttccacgtag 434
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1013 accatttaaagctgcttcgatccttccctttt-gcagggatccaggtggcttccacgtag 955
Query: 435 tgaaccggctcctggccctaagagttccgaaatcgataaagggggaacggtacagtgcgt 494
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 954 tgaaccggctcctggccctaagagttccgaaatcgataaagggg-aacggtacagtgcgt 896
Query: 495 acggaatgagagtattagcaataatactgctactgtgacgctggagattaatgggaagga 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 acggaatgagagtattagcaataatactgctactgtgacgctggagattaatgggaagga 836
Query: 555 gtttgacaagagtgggggctggttatcgagagtgttaagtttttgttctgaggatgccaa 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 gtttgacaagagtgggggctggttatcgagagtgttaagtttttgttctgaggatgccaa 776
Query: 615 ggctctttttactgctgcaactgttagcttcttgttcaaatcggctttggcggagcctag 674
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ggctctttt-actgctgcaactgttagcttcttgttcaaatcggctttggcggagcctag 717
Query: 675 atctataccttccacttctatgtaccctaccctggacgtgggtgatcgcattctagcaga 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 atctataccttccacttctatgtaccctaccctggacgtgggtgatcgcattctagcaga 657
Query: 735 aaaggtttcatatatttttaggaagcctgaagtttcagatattgtgatattcaaggcacc 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 aaaggtttcatatatttttaggaagcctgaagtttcagatattgtgatattcaaggcacc 597
Query: 795 tccaatcttgcaggaaattggttatggctctggtgatgtattcataaagaggattgtggc 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tccaatcttgcaggaaattggttatggctctggtgatgtattcataaagaggattgtggc 537
Query: 855 aacagctggagacatagttgaggtttgtgagggcaagttatatgtgaatggagttgttca 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aacagctggagacatagttgaggtttgtgagggcaagttatatgtgaatggagttgttca 477
Query: 915 agatgaggatttcattctagagccacttgcgtatgaaatggaaccagtgcttgtgccaga 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 agatgaggatttcattctagagccacttgcgtatgaaatggaaccagtgcttgtgccaga 417
Query: 975 aggttatgtctttgtgatgggagacaatcggaataacagctttgattcccataactgggg 1034
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 416 aggttatgtctttgtgatgggagacaatcggaataacagctttgattcccataact-ggg 358
Query: 1035 tccacttcctatccaaaacatagttggtag 1064
||||| ||||||||||||||||||||||||
Sbjct: 357 tccac-tcctatccaaaacatagttggtag 329
>KJC_c08845
Length = 532
Score = 1039 bits (524), Expect = 0.0
Identities = 531/532 (99%), Gaps = 1/532 (0%)
Strand = Plus / Minus
Query: 1397 cctttaaaatcgagggtccatttgatttgcgggtcggtaaccaagacgagctctctttgt 1456
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 531 cctttaaaatcgagggtccatttgatttgcgggt-ggtaaccaagacgagctctctttgt 473
Query: 1457 cgttgccgctgaacgcttcacatacacgcttgaaacgagtactggtgggtgaaggcatca 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cgttgccgctgaacgcttcacatacacgcttgaaacgagtactggtgggtgaaggcatca 413
Query: 1517 cggtagaagtaaaaggatcccaggaactctctcttcttcatactgttgaccatagtttca 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 cggtagaagtaaaaggatcccaggaactctctcttcttcatactgttgaccatagtttca 353
Query: 1577 cagtgaacggaagttttgtaattagcaagaggaaaactggtttctgcgctttttggaagc 1636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cagtgaacggaagttttgtaattagcaagaggaaaactggtttctgcgctttttggaagc 293
Query: 1637 cattgtgtatgccgctacatcctatatacgttaatgggtctgcttcgctgattgcataca 1696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cattgtgtatgccgctacatcctatatacgttaatgggtctgcttcgctgattgcataca 233
Query: 1697 ggactaggaattctgaagctcctgttgaaacaactttgttatcaaaaggaacaattgagt 1756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 ggactaggaattctgaagctcctgttgaaacaactttgttatcaaaaggaacaattgagt 173
Query: 1757 tacttcctgccaaatgttacactaacaatgcctacaagaaccatgctcagcttaatcctt 1816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 tacttcctgccaaatgttacactaacaatgcctacaagaaccatgctcagcttaatcctt 113
Query: 1817 ccttaagtttgaagatcaataggctgggaaaattattgcgaagctttcttagtgacacat 1876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 ccttaagtttgaagatcaataggctgggaaaattattgcgaagctttcttagtgacacat 53
Query: 1877 tgaggaaaagttggaattcgggttttcttaggacaactgtcaaagcatcaac 1928
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 tgaggaaaagttggaattcgggttttcttaggacaactgtcaaagcatcaac 1