Jatropha Genome Database

JcCA0312601.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0312601.30 + phase: 0 
         (168 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10240                                                            246   1e-65

>KJC_c10240 
          Length = 176

 Score =  246 bits (124), Expect = 1e-65
 Identities = 124/124 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacccgaggaaagcagaagatcgaagcccaaaggaaaaatgcagagaggaatcagaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38  atgacccgaggaaagcagaagatcgaagcccaaaggaaaaatgcagagaggaatcagaag 97

                                                                       
Query: 61  gcaaagggctctcagcttgaagccagagctgtcgctctcaaagtcagctgccccatctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  gcaaagggctctcagcttgaagccagagctgtcgctctcaaagtcagctgccccatctgc 157

               
Query: 121 aagg 124
           ||||
Sbjct: 158 aagg 161