Jatropha Genome Database

JcCA0311881.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0311881.20 - phase: 0 
         (2652 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c07185                                                             74   2e-12

>KJC_c07185 
          Length = 807

 Score = 73.8 bits (37), Expect = 2e-12
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                        
Query: 1804 tctccttttgaatggcacccattttctataacatcagctccgggagatgattgcctcagt 1863
            ||||| |||||||||||||||||||| || || |||||||| ||||||||||  || |||
Sbjct: 94   tctccatttgaatggcacccattttccatcacttcagctcctggagatgattatctaagt 35

                     
Query: 1864 gttcacatt 1872
            |||||||||
Sbjct: 34   gttcacatt 26