Jatropha Genome Database
- JcCA0311741.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0311741.10 + phase: 0
(1578 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00200 3096 0.0
KJC_s14970 731 0.0
KJC_s14823 226 1e-58
KJC_c03000 52 4e-06
>KJC_c00200
Length = 1788
Score = 3096 bits (1562), Expect = 0.0
Identities = 1576/1578 (99%), Gaps = 2/1578 (0%)
Strand = Plus / Minus
Query: 1 atgactccaaatctaatcccaccacaagctagcatttcaaaaatgtggagttccgttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1761 atgactccaaatctaatcccaccacaagctagcatttcaaaaatgtggagttccgttcaa 1702
Query: 61 ttgctagagcagcgttatggagtctcatccctgttgcttcctttatcctttacaatatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1701 ttgctagagcagcgttatggagtctcatccctgttgcttcctttatcctttacaatatta 1642
Query: 121 accttttctttcataattttctttaaaaggtctcctcttagcaacaacaagaaaacaatg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1641 accttttctttcataattttctttaaaaggtctcctcttagcaacaacaagaaa-caatg 1583
Query: 181 ccaccttctccatctcggtttccaataataggaaacctccaccaaatcggcttataccct 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1582 ccaccttctccatctcggtttccaataataggaa-cctccaccaaatcggcttataccct 1524
Query: 241 catcggtctcttcaatccttagctcaaatccatggcccaatcatgttgcttcactttggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1523 catcggtctcttcaatccttagctcaaatccatggcccaatcatgttgcttcactttggg 1464
Query: 301 agcactccagtgcttgttatctcgtcatctgaaatggctaaagagataatgaaaacccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1463 agcactccagtgcttgttatctcgtcatctgaaatggctaaagagataatgaaaacccac 1404
Query: 361 gacataattttcgcaaacaggcccaaatcaagaatcggtggcaaacttctgtatcaaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1403 gacataattttcgcaaacaggcccaaatcaagaatcggtggcaaacttctgtatcaaggg 1344
Query: 421 aaagatatagcaaattctccttatggggaatattggaggcaaatgaaaagcgtatgcgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1343 aaagatatagcaaattctccttatggggaatattggaggcaaatgaaaagcgtatgcgtt 1284
Query: 481 ctccatctactaagcaacaaaagagtacagtctttcagaaatgttagagaagaagaaacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1283 ctccatctactaagcaacaaaagagtacagtctttcagaaatgttagagaagaagaaacg 1224
Query: 541 acttgcatgatcaaaagagttgagaagtgttgctctgattgtttaccagtcaatttaagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1223 acttgcatgatcaaaagagttgagaagtgttgctctgattgtttaccagtcaatttaagt 1164
Query: 601 gaagtttttgcgagtcttactaatgatgtagtttgcagagtagcgttggggaggaaatat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 gaagtttttgcgagtcttactaatgatgtagtttgcagagtagcgttggggaggaaatat 1104
Query: 661 agtaaagaaagaaaatttaaggagttattagaggaatttgcgatgtatttgggttttgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 agtaaagaaagaaaatttaaggagttattagaggaatttgcgatgtatttgggttttgtt 1044
Query: 721 gatattggggattacattccatggctaagttggataaaccttgtaaatggattgtacagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 gatattggggattacattccatggctaagttggataaaccttgtaaatggattgtacagt 984
Query: 781 aaggtggagaaagtggctaaagagttggatagctttttagatggagtagttgaagagcat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 aaggtggagaaagtggctaaagagttggatagctttttagatggagtagttgaagagcat 924
Query: 841 agagatgcaaaagatggtgaagatgctaacaacaaagactttgtggacgttttgctttgg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 agagatgcaaaagatggtgaagatgctaacaacaaagactttgtggacgttttgctttgg 864
Query: 901 attcagaaagaaaatatggccggattttgtatggatacaactagcgtcaaggctctcatt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 attcagaaagaaaatatggccggattttgtatggatacaactagcgtcaaggctctcatt 804
Query: 961 ttggatgtatttgcggcaggtacagacacaacatacacagtcctagaatgggcaatgaca 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ttggatgtatttgcggcaggtacagacacaacatacacagtcctagaatgggcaatgaca 744
Query: 1021 gagcttttaagacatcctgagaaaatgaagaaagtccaaaatgagttgcgatcagaaatg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gagcttttaagacatcctgagaaaatgaagaaagtccaaaatgagttgcgatcagaaatg 684
Query: 1081 gcaaacaaagaatcaaaagtaataacagaggatgatataagcaaatttgattacttgaaa 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gcaaacaaagaatcaaaagtaataacagaggatgatataagcaaatttgattacttgaaa 624
Query: 1141 gcaataataaaggaaacactccgcttgcatcctccaattccattactggttcctcgaatg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gcaataataaaggaaacactccgcttgcatcctccaattccattactggttcctcgaatg 564
Query: 1201 tcaacccaagatgttagaataaaaggcttcgaccttgctgctggaacccaagtaattatc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tcaacccaagatgttagaataaaaggcttcgaccttgctgctggaacccaagtaattatc 504
Query: 1261 aattcttgggcaataggaagggatcctgcattatgggatcgtccggaagaattctggcca 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aattcttgggcaataggaagggatcctgcattatgggatcgtccggaagaattctggcca 444
Query: 1321 gagaggtttttgaaaaatcgtatagatttcagaggacaagattttgaattgataccattt 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gagaggtttttgaaaaatcgtatagatttcagaggacaagattttgaattgataccattt 384
Query: 1381 ggagccggcaggagaatttgtccaggcattcagtttgctatgagcacggatgagcttgca 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggagccggcaggagaatttgtccaggcattcagtttgctatgagcacggatgagcttgca 324
Query: 1441 ctggcaaatctactgtataagtttgactgggcattacatggtcttgaaagaggagaggac 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctggcaaatctactgtataagtttgactgggcattacatggtcttgaaagaggagaggac 264
Query: 1501 ttggacgttgctgagtgcaccggcctcaccattcaccgtaaatttcctcttttggctgtt 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttggacgttgctgagtgcaccggcctcaccattcaccgtaaatttcctcttttggctgtt 204
Query: 1561 gcaactccatattcttaa 1578
||||||||||||||||||
Sbjct: 203 gcaactccatattcttaa 186
>KJC_s14970
Length = 419
Score = 731 bits (369), Expect = 0.0
Identities = 372/373 (99%)
Strand = Plus / Plus
Query: 136 attttctttaaaaggtctcctcttagcaacaacaagaaaacaatgccaccttctccatct 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attttctttaaaaggtctcctcttagcaacaacaagaaaacaatgccaccttctccatct 60
Query: 196 cggtttccaataataggaaacctccaccaaatcggcttataccctcatcggtctcttcaa 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggtttccaataataggaaacctccaccaaatcggcttataccctcatcggtctcttcaa 120
Query: 256 tccttagctcaaatccatggcccaatcatgttgcttcactttgggagcactccagtgctt 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccttagctcaaatccatggcccaatcatgttgcttcactttgggagcactccagtgctt 180
Query: 316 gttatctcgtcatctgaaatggctaaagagataatgaaaacccacgacataattttcgca 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttatctcgtcatctgaaatggctaaagagataatgaaaacccacgacataattttcgca 240
Query: 376 aacaggcccaaatcaagaatcggtggcaaacttctgtatcaagggaaagatatagcaaat 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacaggcccaaatcaagaatcggtggcaaacttctgtatcaagggaaagatatagcaaat 300
Query: 436 tctccttatggggaatattggaggcaaatgaaaagcgtatgcgttctccatctactaagc 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctccttatggggaatattggaggcaaatgaaaagcgtatgcgttctccatctactaagc 360
Query: 496 aacaaaagagtac 508
|||||||| ||||
Sbjct: 361 aacaaaagggtac 373
>KJC_s14823
Length = 144
Score = 226 bits (114), Expect = 1e-58
Identities = 141/146 (96%), Gaps = 3/146 (2%)
Strand = Plus / Minus
Query: 494 gcaacaaaagagtacagtctttcagaaa-tgttagagaagaagaaacgacttgcatgatc 552
|||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 144 gcaacaaaagagtacaagctttcagaaaatgttagagaagaagaaacgacttgcatgatc 85
Query: 553 aaaagagttgagaagtgttgctctgattgtttaccagtcaatttaagtgaagtttttgcg 612
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 84 aaa-gagttgagaagtgttgctctgattgtttaccagtcaatttaagtgaag-ttttgcg 27
Query: 613 agtcttactaatgatgtagtttgcag 638
||||||||||||||||||||||||||
Sbjct: 26 agtcttactaatgatgtagtttgcag 1
>KJC_c03000
Length = 1003
Score = 52.0 bits (26), Expect = 4e-06
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 1306 gaagaattctggccagagaggtttttgaaaaatcgtatagatttcagaggacaagatttt 1365
|||||||||||||| ||||| |||||| | |||| ||| ||||||| ||| || || |||
Sbjct: 795 gaagaattctggcctgagagatttttggacaatcctatcgatttcaaaggtcatgacttt 854
Query: 1366 gaattgataccatttggagccggcaggaga 1395
|| || || |||||||| || || ||||||
Sbjct: 855 gagttcatcccatttggtgctggtaggaga 884