Jatropha Genome Database
- JcCA0311501.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0311501.20 + phase: 0
(1026 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05157 1306 0.0
KJC_c01423 406 e-113
>KJC_c05157
Length = 786
Score = 1306 bits (659), Expect = 0.0
Identities = 683/687 (99%), Gaps = 3/687 (0%)
Strand = Plus / Plus
Query: 1 atggcctcttcgatgatcaacggagcagaaaacctcactcttgcgagaggcataacccaa 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 102 atggcctcttcgatgatcaacggagctgaaaacctcactcttgcgagaggcataacccaa 161
Query: 61 aaaggattaggtttttcgggatcagattttcatgggaagtactttccgagagtcaattta 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 aaaggattaggtttt-cgggatcagattttcatgggaagtactttccgagagtcaattta 220
Query: 121 gtgtctagcgctagaatttttaaggcaacaagaatagtgacacccaaatgcagtttgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gtgtctagcgctagaatttttaaggcaacaagaatagtgacacccaaatgcagtttgtca 280
Query: 181 gcctccaggccagcctctcaacccaggtttatccaacacaagaaagaagcttttt-ggtt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 281 gcctccaggccagcctctcaacccaggtttatccaacacaagaaagaagcttttttggtt 340
Query: 240 ctacagattcctttcaattgtctatgaccatgtgataaaccctgggcactggactgaaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ctacagattcctttcaattgtctatgaccatgtgataaaccctgggcactggactgaaga 400
Query: 300 catgagggatgatgcgttagagcctgctgatcttaataacaggaatatgttagttgtaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 catgagggatgatgcgttagagcctgctgatcttaataacaggaatatgttagttgtaga 460
Query: 360 tgtcggtggtggcactggttttactactctgggtattgttaagcatgtagatgctaaaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tgtcggtggtggcactggttttactactctgggtattgttaagcatgtagatgctaaaaa 520
Query: 420 tgttactattcttgatcagtccccgcatcagcttgcaaaggctaagcaaaaggagccctt 479
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 521 tgttactattcttgatcagtccc-gcatcagcttgcaaaggctaagcaaaaggagccctt 579
Query: 480 gaaagattgtaagattattgagggtgatgcagaggatctgccatttcctactgattatgc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gaaagattgtaagattattgagggtgatgcagaggatctgccatttcctactgattatgc 639
Query: 540 tgacagatatgtgtctgctgggagtattgagtactggcctgacccacaacgtggcatcaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tgacagatatgtgtctgctgggagtattgagtactggcctgacccacaacgtggcatcaa 699
Query: 600 ggaagcatatagggtcttgaaactaggaggaaaagcctgcttaattggcccggtgtaccc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ggaagcatatagggtcttgaaactaggaggaaaagcctgcttaattggcccggtgtaccc 759
Query: 660 aacattttggttgtctcgcttctttgc 686
|||||||||||||||||||||||||||
Sbjct: 760 aacattttggttgtctcgcttctttgc 786
>KJC_c01423
Length = 975
Score = 406 bits (205), Expect = e-113
Identities = 496/593 (83%)
Strand = Plus / Minus
Query: 205 aggtttatccaacacaagaaagaagctttttggttctacagattcctttcaattgtctat 264
||||| || |||||||||||||| || ||||||||||| || ||| | || ||||| |||
Sbjct: 603 aggttcattcaacacaagaaagaggcattttggttctataggttcttgtctattgtttat 544
Query: 265 gaccatgtgataaaccctgggcactggactgaagacatgagggatgatgcgttagagcct 324
|| ||||| ||||||||||| ||||||||||| || ||||| ||||| || | || ||
Sbjct: 543 gatcatgtcataaaccctggtcactggactgaggatatgagagatgaggcacttgaaccg 484
Query: 325 gctgatcttaataacaggaatatgttagttgtagatgtcggtggtggcactggttttact 384
|| |||||| || |||||| || ||| |||||||| |||||||| ||||| ||||||
Sbjct: 483 gcagatctttttagtaggaatttgaaagtggtagatgttggtggtggtactggatttact 424
Query: 385 actctgggtattgttaagcatgtagatgctaaaaatgttactattcttgatcagtccccg 444
||| ||||||||||||| ||||| ||||| || |||||||| |||||||||||||| ||
Sbjct: 423 actttgggtattgttaaacatgtggatgccaagaatgttacaattcttgatcagtcacct 364
Query: 445 catcagcttgcaaaggctaagcaaaaggagcccttgaaagattgtaagattattgagggt 504
|| |||||||| || |||||||| |||||||||||||| || || |||||||||| ||
Sbjct: 363 caccagcttgccaaagctaagcagaaggagcccttgaaggagtgccagattattgaaggg 304
Query: 505 gatgcagaggatctgccatttcctactgattatgctgacagatatgtgtctgctgggagt 564
|||||||| ||||| || || || ||||||||||| || ||||||||||||||||||||
Sbjct: 303 gatgcagaagatcttcccttcccaactgattatgcagatagatatgtgtctgctgggagc 244
Query: 565 attgagtactggcctgacccacaacgtggcatcaaggaagcatatagggtcttgaaacta 624
|| ||||||||||| || ||||| ||||||||||||||||| || ||||| ||||| |
Sbjct: 243 atcgagtactggccagatccacagcgtggcatcaaggaagcgtacagggtgctgaaaatc 184
Query: 625 ggaggaaaagcctgcttaattggcccggtgtacccaacattttggttgtctcgcttcttt 684
||||||||||| || | || || || ||||||||||| |||||| |||||||||| |||
Sbjct: 183 ggaggaaaagcttgtattataggtcctgtgtacccaaccttttggctgtctcgctttttt 124
Query: 685 gctgatgtttggatgctcttcccaaaggaggaggagtacattgaatggtttcaaaaggcc 744
|| ||| | |||||||||||||| |||||||| ||||| || |||||||||||||||||
Sbjct: 123 gccgatatgtggatgctcttccctaaggaggaagagtatatagaatggtttcaaaaggct 64
Query: 745 gggtttaaggatgttcagctgaagaggattggcccaaaatggtatcgtggtgt 797
||||| |||||||| | ||||| || || || ||||||||||| ||||||||
Sbjct: 63 gggttcaaggatgtcaaactgaaaagaataggtccaaaatggtaccgtggtgt 11