Jatropha Genome Database
- JcCA0311331.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0311331.10 - phase: 0
(939 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04690 565 e-161
KJC_c08164 92 3e-18
>KJC_c04690
Length = 625
Score = 565 bits (285), Expect = e-161
Identities = 285/285 (100%)
Strand = Plus / Plus
Query: 655 cctgaatgtgatgagtctgatacatctactgttgagtctggtcaatggattagctttcag 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgaatgtgatgagtctgatacatctactgttgagtctggtcaatggattagctttcag 60
Query: 715 aaatttgctccctctatggctgcaatgcctacctctccaacctataatcttgtgaaacct 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatttgctccctctatggctgcaatgcctacctctccaacctataatcttgtgaaacct 120
Query: 775 gttgctggacaaattttgtctggtaatgtgatacaagagaatggaaggagtatggaattt 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttgctggacaaattttgtctggtaatgtgatacaagagaatggaaggagtatggaattt 180
Query: 835 gagtttggcagtgttcaggtgaagccatgggaaggagagaggattcatgaaataggattg 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagtttggcagtgttcaggtgaagccatgggaaggagagaggattcatgaaataggattg 240
Query: 895 gatgacctagagctcacacttggaaatgggaaggctcggagttag 939
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgacctagagctcacacttggaaatgggaaggctcggagttag 285
>KJC_c08164
Length = 1275
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 852 ggtgaagccatgggaaggagagaggattcatgaaataggattggatgacctagagctcac 911
|||||||||||||||||| |||||||| |||||||||||| ||||||| || ||||||||
Sbjct: 377 ggtgaagccatgggaaggtgagaggatccatgaaataggagtggatgatctcgagctcac 318
Query: 912 acttgg 917
||||||
Sbjct: 317 acttgg 312
Score = 61.9 bits (31), Expect = 3e-09
Identities = 106/131 (80%)
Strand = Plus / Minus
Query: 100 gctatagctgctaagatatttgcgggattaagggctcaagggaattataatttgcccaaa 159
||||||||||||||||||| | | || | | |||||||| || ||||| | || |||
Sbjct: 1167 gctatagctgctaagatatattcagggcttcgagctcaaggaaactataaactccctaaa 1108
Query: 160 cattgcgataataatgaggtcttgaaagctttgtgttctgaagctggctgggttgttgaa 219
||||| |||||||||||||| ||||||||| | ||| | || ||||| ||| | ||||||
Sbjct: 1107 cattgtgataataatgaggtgttgaaagctctttgtgcagaggctggttggatcgttgaa 1048
Query: 220 gatgatggcac 230
|| ||||||||
Sbjct: 1047 gaagatggcac 1037
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 643 ccagctactatacctgaatgtgatgagtctgatacatctactgttgagtctggtc 697
|||||||||||||| ||||||||||| || ||| | || |||||||| |||||||
Sbjct: 617 ccagctactataccagaatgtgatgaatcggatgcctcaactgttgattctggtc 563