Jatropha Genome Database
- JcCA0311301.40
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0311301.40 - phase: 0 /partial
(714 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c11417 1185 0.0
>KJC_c11417
Length = 637
Score = 1185 bits (598), Expect = 0.0
Identities = 633/638 (99%), Gaps = 5/638 (0%)
Strand = Plus / Minus
Query: 67 cttttaattgccaaggaatcatctttcaattccaagcaaactctttt-gcgatctcttc- 124
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 637 cttttaattgccaaggaatcatctttcaattccaagcaaactctttttgcgatctcttct 578
Query: 125 ataagtcacctcttcctttggttcctcgctcgatcagaac-agggaattcaaggcctgtg 183
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 577 ataagtcacctcttcctttggttcctcgctcgatcagaacgagggaattcaaggcctgtg 518
Query: 184 ctctattctttgagattcgatcatacaatggctacccaatctgagcctaaatcagtccat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ctctattctttgagattcgatcatacaatggctacccaatctgagcctaaatcagtccat 458
Query: 244 gacttcactgttaaggatgctagggggaacgatgttgatctcagcacatacaagggaaag 303
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 457 gacttcactgttaaggatgctagggggaac-atgttgatctcagcacatacaagggaaag 399
Query: 304 gttctcattattgttaatgttgcttcacaatgtggcttgaccaattccaactacactgaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gttctcattattgttaatgttgcttcacaatgtggcttgaccaattccaactacactgaa 339
Query: 364 ctgactcagttataccagaagtacaaggatcaaggtttggagattctggcttttccatgc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ctgactcagttataccagaagtacaaggatcaaggtttggagattctggcttttccatgc 279
Query: 424 aatcaatttggatctcaggagccagggaccaatgaacagattgtggagttt-gcctgcac 482
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 278 aatcaatttggatctcaggagccagggaccaatgaacagattgtggagttttgcctgcac 219
Query: 483 tcgcttcaaggctgagtatccaatattcgataagatcgatgtcaatggaaacaatgctgc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tcgcttcaaggctgagtatccaatattcgataagatcgatgtcaatggaaacaatgctgc 159
Query: 543 tgctctttacaagttcttgaagtccagcaaaggaggaatttttggggatagcatcaagtg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tgctctttacaagttcttgaagtccagcaaaggaggaatttttggggatagcatcaagtg 99
Query: 603 gaatttcaccaagtttctggctgataaagatggcaatgttgtgaaccgatatgctcccac 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 gaatttcaccaagtttctggctgataaagatggcaatgttgtgaaccgatatgctcccac 39
Query: 663 tacttctcctcttagcatcgagaaagatgtgaagaaac 700
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 tacttctcctcttagcatcgagaaagatgtgaagaaac 1