Jatropha Genome Database

JcCA0310961.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0310961.20 + phase: 0 /partial
         (210 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04863                                                            147   1e-35

>KJC_c04863 
          Length = 720

 Score =  147 bits (74), Expect = 1e-35
 Identities = 95/98 (96%), Gaps = 3/98 (3%)
 Strand = Plus / Plus

                                                                       
Query: 113 aggagaatgtggaagcattttgtaggaatcacgttttcgaccttagaatccttgtcgatg 172
           ||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||
Sbjct: 1   aggagaatgtggaagcattttgtagga-tcacgttt-cgacct-agaatccttgtcgatg 57

                                                 
Query: 173 tgagtcaaattgacatgtcaactactgtattgggttac 210
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 58  tgagtcaaattgacatgtcaactactgtattgggttac 95