Jatropha Genome Database
- JcCA0310221.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0310221.20 + phase: 0
(1575 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04286 1568 0.0
KJC_c07442 88 8e-17
KJC_c04469 66 3e-10
>KJC_c04286
Length = 815
Score = 1568 bits (791), Expect = 0.0
Identities = 812/815 (99%), Gaps = 3/815 (0%)
Strand = Plus / Minus
Query: 146 ttgactgcctcagaaactttagtcct-acacaagat-cttgaaatcctcatcaaacgc-t 202
|||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |
Sbjct: 815 ttgactgcctcagaaactttagtccttacacaagatacttgaaatcctcatcaaacgcct 756
Query: 203 ctcccttgcccactctcgtcacttacaggccagtttgggaaggtggtcaatatgagggtg 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ctcccttgcccactctcgtcacttacaggccagtttgggaaggtggtcaatatgagggtg 696
Query: 263 atgaaacaaaacgacaagatgcacttcgtttagcaatgcaattgggtgctaattatgtgg 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 atgaaacaaaacgacaagatgcacttcgtttagcaatgcaattgggtgctaattatgtgg 636
Query: 323 atgttgaacttgaggttgctcatgactttaatagttcaatatacggaaagaagcctgata 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 atgttgaacttgaggttgctcatgactttaatagttcaatatacggaaagaagcctgata 576
Query: 383 acttcagagtcattgtttcttctcacaattttcataatacaccatcagctgaggccattg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 acttcagagtcattgtttcttctcacaattttcataatacaccatcagctgaggccattg 516
Query: 443 ccaatcttgttgcaagaatacaagctactggagctgacattatcaagattgcaacaactg 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ccaatcttgttgcaagaatacaagctactggagctgacattatcaagattgcaacaactg 456
Query: 503 cattagacattacagactgtgctcgcattttcagaatcatggttcactctcagattccag 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cattagacattacagactgtgctcgcattttcagaatcatggttcactctcagattccag 396
Query: 563 taattggaattgttatgggtgagaggggacagatttcgcggttgcttagccccaagtttg 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 taattggaattgttatgggtgagaggggacagatttcgcggttgcttagccccaagtttg 336
Query: 623 gcgggtacctgacttatggtgctcttgaggcaggtgctatatcagctcctggacaaccaa 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gcgggtacctgacttatggtgctcttgaggcaggtgctatatcagctcctggacaaccaa 276
Query: 683 ctgtaaaggatttgctggatttatacaactttagacttataaggcctgataccaaagttt 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ctgtaaaggatttgctggatttatacaactttagacttataaggcctgataccaaagttt 216
Query: 743 atggcattattgggaaacctgttggacatagcaagagtcctctcttgttcaatgcagctt 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atggcattattgggaaacctgttggacatagcaagagtcctctcttgttcaatgcagctt 156
Query: 803 ttaaatctgtcggtcttaacgcagtttatatgcattttcttgtggatgatgtggagaaat 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ttaaatctgtcggtcttaacgcagtttatatgcattttcttgtggatgatgtggagaaat 96
Query: 863 ttttcaacacctattcttctgttgattttgcttctggatgcagttgcactattcctcata 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 ttttcaacacctattcttctgttgattttgcttctggatgcagttgcactattcctcata 36
Query: 923 aggaagttgcacttaaatgcatggatgagattgac 957
|||||||||||||||||||||||||||||||||||
Sbjct: 35 aggaagttgcacttaaatgcatggatgagattgac 1
>KJC_c07442
Length = 426
Score = 87.7 bits (44), Expect = 8e-17
Identities = 101/120 (84%)
Strand = Plus / Minus
Query: 394 attgtttcttctcacaattttcataatacaccatcagctgaggccattgccaatcttgtt 453
||||||||||||||||||| | | ||| ||||| | |||| |||||| | ||||||
Sbjct: 247 attgtttcttctcacaattatgaatgtactccatctgtagaggacattgctgaccttgtt 188
Query: 454 gcaagaatacaagctactggagctgacattatcaagattgcaacaactgcattagacatt 513
|| || |||||||||||||||||||||||| | |||||||||||||| || |||||||||
Sbjct: 187 gccaggatacaagctactggagctgacattgtgaagattgcaacaacggctttagacatt 128
>KJC_c04469
Length = 1448
Score = 65.9 bits (33), Expect = 3e-10
Identities = 93/113 (82%)
Strand = Plus / Plus
Query: 664 tcagctcctggacaaccaactgtaaaggatttgctggatttatacaactttagacttata 723
||||||||||| ||||||| | ||||| | |||||| ||||||| || |||| ||
Sbjct: 686 tcagctcctggtcaaccaatgatcaaggacctcctggatctatacaatttcagacaaatt 745
Query: 724 aggcctgataccaaagtttatggcattattgggaaacctgttggacatagcaa 776
|||||||||| ||||| ||||||||||||||||| |||||||| || |||||
Sbjct: 746 gggcctgatactaaagtatatggcattattgggaagcctgttgggcacagcaa 798