Jatropha Genome Database

JcCA0310221.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0310221.10 - phase: 0 
         (783 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02939                                                           1005   0.0  

>KJC_c02939 
          Length = 560

 Score = 1005 bits (507), Expect = 0.0
 Identities = 507/507 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcggggcaaagccagaggttgaatgtagttcctacagtcactatgcttgctgtcatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51  atgtcggggcaaagccagaggttgaatgtagttcctacagtcactatgcttgctgtcatg 110

                                                                       
Query: 61  aaagctcgccttgttggtgccacaaggggtcatgcccttctgaagaagaaaagtgatgct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 aaagctcgccttgttggtgccacaaggggtcatgcccttctgaagaagaaaagtgatgct 170

                                                                       
Query: 121 ttaactgtgcagttccgtcaaattctcaaaaagatcgtcactgcaaaagaatcaatggga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ttaactgtgcagttccgtcaaattctcaaaaagatcgtcactgcaaaagaatcaatggga 230

                                                                       
Query: 181 gatataatgaagtcgtctgcgtttgctctcactgaagcgaaatatgttgcgggggagaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gatataatgaagtcgtctgcgtttgctctcactgaagcgaaatatgttgcgggggagaat 290

                                                                       
Query: 241 gttaagcatgttgtccttgagaatgtccaaagtgcatctcttaaagttcgatctcggcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gttaagcatgttgtccttgagaatgtccaaagtgcatctcttaaagttcgatctcggcaa 350

                                                                       
Query: 301 gaaaatgttgctggtgtgaagctgcctaagtttgagtatttcactgaaggtgagaccaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gaaaatgttgctggtgtgaagctgcctaagtttgagtatttcactgaaggtgagaccaag 410

                                                                       
Query: 361 aatgacctcactgggttggccaggggcggccaacaggttcaggcgtgtcgtgctgcttat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aatgacctcactgggttggccaggggcggccaacaggttcaggcgtgtcgtgctgcttat 470

                                                                       
Query: 421 ataaaatcaattgaagttcttgttgagcttgcatcgcttcagacatcattcttaacactg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ataaaatcaattgaagttcttgttgagcttgcatcgcttcagacatcattcttaacactg 530

                                      
Query: 481 gatgaggcaatcaagacgacaaatcgt 507
           |||||||||||||||||||||||||||
Sbjct: 531 gatgaggcaatcaagacgacaaatcgt 557