Jatropha Genome Database

JcCA0309351.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0309351.30 + phase: 0 /partial/short
         (129 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01317                                                            184   3e-47

>KJC_c01317 
          Length = 602

 Score =  184 bits (93), Expect = 3e-47
 Identities = 108/113 (95%)
 Strand = Plus / Minus

                                                                       
Query: 17  ggatcaatggatccctagcacgccgagcaatcaaggatttgatggcaagaggttctatca 76
           ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 338 ggatcaatggatctctagcacgccgggcaatcaaggatttgatggcaagaggttcgatca 279

                                                                
Query: 77  ggatgatatctgctcatgctagtcagcaaatttacaccagagccacaaatacc 129
           |||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 278 ggatgatatctgctcatgctagtcagcagatttacaccagagctacaaatacc 226