Jatropha Genome Database

JcCA0309311.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0309311.10 - phase: 0 /partial
         (266 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01228                                                            474   e-134

>KJC_c01228 
          Length = 980

 Score =  474 bits (239), Expect = e-134
 Identities = 239/239 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggcagaaagttcttcgtcggcggcaactggaaatgcaatggaacaactgaggaggtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7   atgggcagaaagttcttcgtcggcggcaactggaaatgcaatggaacaactgaggaggtg 66

                                                                       
Query: 61  aagaagatcgtcacaaccttgaacgaagctgaggtcccttctgaggatgttgtggaggtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  aagaagatcgtcacaaccttgaacgaagctgaggtcccttctgaggatgttgtggaggtt 126

                                                                       
Query: 121 gttgtgagccctccctttgtatttcttccttttgtgaaaagtctgttgagacctgacttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gttgtgagccctccctttgtatttcttccttttgtgaaaagtctgttgagacctgacttc 186

                                                                      
Query: 181 caggtagcagcacaaaactgctgggttcgcaaaggtggtgctttcaccggagaggttag 239
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 caggtagcagcacaaaactgctgggttcgcaaaggtggtgctttcaccggagaggttag 245