Jatropha Genome Database

JcCA0309211.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0309211.20 + phase: 1 /partial/short
         (137 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00895                                                            272   2e-73

>KJC_c00895 
          Length = 1084

 Score =  272 bits (137), Expect = 2e-73
 Identities = 137/137 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggaagctcccatgggtcgaacttgtagagatcgatttcggcgattatcggaacagcgatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 ggaagctcccatgggtcgaacttgtagagatcgatttcggcgattatcggaacagcgatt 915

                                                                       
Query: 61  gtctgagatgcgcatttacggcagagatagtgcatcacaagctcctcatcggttggatga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 gtctgagatgcgcatttacggcagagatagtgcatcacaagctcctcatcggttggatga 975

                            
Query: 121 aacctgaatcctggtgg 137
           |||||||||||||||||
Sbjct: 976 aacctgaatcctggtgg 992