Jatropha Genome Database
- JcCA0309211.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0309211.10 - phase: 1 /partial
(504 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00895 999 0.0
KJC_c00102 70 6e-12
KJC_c01994 54 3e-07
>KJC_c00895
Length = 1084
Score = 999 bits (504), Expect = 0.0
Identities = 504/504 (100%)
Strand = Plus / Minus
Query: 1 gaatggccttgtatggggaaaaggagtggtatttcttttcaccgcgggaccgtaaatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 gaatggccttgtatggggaaaaggagtggtatttcttttcaccgcgggaccgtaaatatc 794
Query: 61 ccaacggatcgaggcctaatcgggctgccggaactggctattggaaggctaccggagccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 ccaacggatcgaggcctaatcgggctgccggaactggctattggaaggctaccggagccg 734
Query: 121 ataagccgattgggcaaccgaagcccgttggaatcaagaaagctttggttttttacgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ataagccgattgggcaaccgaagcccgttggaatcaagaaagctttggttttttacgcag 674
Query: 181 gcaaagctcctaaaggagaaaaaacaaactggattatgcacgaatatcggctagccgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gcaaagctcctaaaggagaaaaaacaaactggattatgcacgaatatcggctagccgatg 614
Query: 241 tggatcgctccgctcggaagaagaacagcttaaggctagatgattgggtgctgtgtcgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tggatcgctccgctcggaagaagaacagcttaaggctagatgattgggtgctgtgtcgca 554
Query: 301 tatacaacaagaaaggtacaattgagaagcaaggacaagtaacaagtcggaaattgaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tatacaacaagaaaggtacaattgagaagcaaggacaagtaacaagtcggaaattgaact 494
Query: 361 cgcaggaaataatagaggataaaaagccggagattatggcgccgcctcctgctccgtcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cgcaggaaataatagaggataaaaagccggagattatggcgccgcctcctgctccgtcat 434
Query: 421 cggcgactggaactggaaatgattacgtttacttcgagccgtcggattcggtgccgaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cggcgactggaactggaaatgattacgtttacttcgagccgtcggattcggtgccgaagt 374
Query: 481 tgaatacggactcgagttgctcgg 504
||||||||||||||||||||||||
Sbjct: 373 tgaatacggactcgagttgctcgg 350
>KJC_c00102
Length = 1506
Score = 69.9 bits (35), Expect = 6e-12
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 147 gttggaatcaagaaagctttggttttttacgcaggcaaagctcctaaaggagaaaaaaca 206
||||| || |||||||||||||||||||||| || |||||||| |||||| |||||
Sbjct: 1073 gttggtattaagaaagctttggttttttacgttgggaaagctccgaaaggaaccaaaacg 1014
Query: 207 aactggattatgcacgaatatcg 229
|| ||||||||||| ||||||||
Sbjct: 1013 aattggattatgcatgaatatcg 991
>KJC_c01994
Length = 951
Score = 54.0 bits (27), Expect = 3e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 185 agctcctaaaggagaaaaaacaaactggattatgcacgaatat 227
||||||||||||||||||||| || ||| ||||||| ||||||
Sbjct: 477 agctcctaaaggagaaaaaaccaattgggttatgcatgaatat 519