Jatropha Genome Database
- JcCA0309141.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0309141.10 - phase: 0 /pseudo/partial
(699 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05535 603 e-172
>KJC_c05535
Length = 944
Score = 603 bits (304), Expect = e-172
Identities = 341/347 (98%), Gaps = 5/347 (1%)
Strand = Plus / Minus
Query: 1 ccgttgagcaagtgatggaggcgatgcacgcaccggtttatttcgaacgctatgagattc 60
||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 944 ccgttgagcaagtgatg-aggcgatgcacgnaccggtttatttcgaacgctatgagattc 886
Query: 61 acggcgacatgaaaaaggtgccgccggaggtcatcgagtcgattaagaaaaataaggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 885 acggcgacatgaaaaaggtgccgccggaggtcatcgagtcgattaagaaaa-taaggttt 827
Query: 121 gtttgaaaggaggattagcaactcccatgggcggtggtgttagttccttgaatgtgcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 gtttgaaaggaggattagcaactcccatgggcggtggtgttagttccttgaatgtgcagt 767
Query: 181 tgaggaaagagcttgatttgtacgcttcgctcgttaattgctttaatttgcctggattgc 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 766 tgaggaaagagcttgatttgtacgcttcgctcgttaattgc-ttaatttgcctggattgc 708
Query: 241 caacccgccatgaaaatgttgatattgttgtgattagggagaacactgaaggagaatact 300
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 caa-ccgccatg-aaatgttgatattgttgtgattagggagaacactgaaggagaatact 650
Query: 301 ctggtctcgagcacgaggtcgttcctggtgttgttgaaagccttaag 347
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ctggtctcgagcacgaggtcgttcctggtgttgttgaaagccttaag 603
Score = 492 bits (248), Expect = e-139
Identities = 262/264 (99%), Gaps = 2/264 (0%)
Strand = Plus / Minus
Query: 348 tctgaacaacaggaagaaagtgactgctgtgcataaggcaaacatcatgaagcttgcaga 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tctgaacaacaggaagaaagtgactgctgtgcataaggcaaacatcatgaagcttgcaga 487
Query: 408 tggtttgttcttggaatcttgtcgggaagtctcttcaaaatatcctggaatcaaatataa 467
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 486 tggttt-ttcttggaatcttgtcgg-aagtctcttcaaaatatcctggaatcaaatataa 429
Query: 468 tgaaattattgtggataactgctgtatgcaacttgtttcaaagccagagcaatttgatgt 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaaattattgtggataactgctgtatgcaacttgtttcaaagccagagcaatttgatgt 369
Query: 528 catggtgacacctaatctttatgggaatcttgttgcaaatacagctgcaggtattgctgg 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 catggtgacacctaatctttatgggaatcttgttgcaaatacagctgcaggtattgctgg 309
Query: 588 tggcacgggagtcatgccaggagg 611
||||||||||||||||||||||||
Sbjct: 308 tggcacgggagtcatgccaggagg 285