Jatropha Genome Database

JcCA0308861.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0308861.20 - phase: 0 
         (402 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c08859                                                            323   2e-88

>KJC_c08859 
          Length = 376

 Score =  323 bits (163), Expect = 2e-88
 Identities = 163/163 (100%)
 Strand = Plus / Plus

                                                                       
Query: 240 cgagtcagtggctcacaagattgcttctacgaccctgacaaaatacccccaaatatctgc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cgagtcagtggctcacaagattgcttctacgaccctgacaaaatacccccaaatatctgc 60

                                                                       
Query: 300 tgttcgcgtaaaggttgggaagcctcatgttgctgttcatggtcctctcgattatttggg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgttcgcgtaaaggttgggaagcctcatgttgctgttcatggtcctctcgattatttggg 120

                                                      
Query: 360 ggttgagattctcagacgcagaagtattgatgtttcgagctaa 402
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggttgagattctcagacgcagaagtattgatgtttcgagctaa 163