Jatropha Genome Database
- JcCA0308831.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0308831.10 - phase: 0
(456 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01681 904 0.0
KJC_s16052 311 8e-85
>KJC_c01681
Length = 521
Score = 904 bits (456), Expect = 0.0
Identities = 456/456 (100%)
Strand = Plus / Plus
Query: 1 atggcaatttcagctgcagaaacccaatccaacccaactactaaaccaaacactcaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 atggcaatttcagctgcagaaacccaatccaacccaactactaaaccaaacactcaactc 124
Query: 61 gaagtcgaatcagtgaaatgctattcctgtggatttacagaggaatgcacccctgcttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gaagtcgaatcagtgaaatgctattcctgtggatttacagaggaatgcacccctgcttac 184
Query: 121 atctctcgagttcgcgagcgcttcaatggccgttggctttgtgggctctgtgttgaagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 atctctcgagttcgcgagcgcttcaatggccgttggctttgtgggctctgtgttgaagcc 244
Query: 181 gtgaaagatgaggttttgagatcagacaggcttatctctaccgaagaagctttgaacagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gtgaaagatgaggttttgagatcagacaggcttatctctaccgaagaagctttgaacagg 304
Query: 241 catattaatttctgcaacaagtttaaatcttctattcccctgcatcaaacagagcatcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 catattaatttctgcaacaagtttaaatcttctattcccctgcatcaaacagagcatcct 364
Query: 301 atttttgttatgagcagaattcttcgtaggagtttggattcacctcgtgctcttcgctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atttttgttatgagcagaattcttcgtaggagtttggattcacctcgtgctcttcgctcc 424
Query: 361 aattcaagtagtgttttgcctgatgttgatgttgaaaagatcaaaggatcggcattagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aattcaagtagtgttttgcctgatgttgatgttgaaaagatcaaaggatcggcattagtt 484
Query: 421 cgatccgaaagttgtttttctgctttgtctcgttga 456
||||||||||||||||||||||||||||||||||||
Sbjct: 485 cgatccgaaagttgtttttctgctttgtctcgttga 520
>KJC_s16052
Length = 240
Score = 311 bits (157), Expect = 8e-85
Identities = 178/181 (98%), Gaps = 3/181 (1%)
Strand = Plus / Plus
Query: 1 atggcaatttcagctgcagaaacccaatccaacccaactactaaaccaaacactcaactc 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 62 atggcaatttcagctgcagaaacccaatccaacc-aactactaaaccaaacactcaactc 120
Query: 61 gaagtcgaatcagtgaaatgctattcctgtgga-tttacagaggaatgcacccctgctta 119
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 121 gaagtcgaatcagtgaaatgctattcctgtggagtttacagaggaatgcaccc-tgctta 179
Query: 120 catctctcgagttcgcgagcgcttcaatggccgttggctttgtgggctctgtgttgaagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 catctctcgagttcgcgagcgcttcaatggccgttggctttgtgggctctgtgttgaagc 239
Query: 180 c 180
|
Sbjct: 240 c 240