Jatropha Genome Database
- JcCA0308501.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0308501.10 - phase: 0
(984 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c07662 841 0.0
KJC_c12218 244 3e-64
>KJC_c07662
Length = 458
Score = 841 bits (424), Expect = 0.0
Identities = 457/463 (98%), Gaps = 5/463 (1%)
Strand = Plus / Plus
Query: 204 atggtctgagtacagatactatgatcccaagacagttggtttggattttgagggaatgat 263
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 atggtctgagtacagatactatgatcccaagacagttggtttggattt-gagggaatgat 59
Query: 264 atcagacataaaggcagctcctgaaggatcgtttattttgctacatggctgtgctcacaa 323
||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 60 atcagacataa-ggcagctc-tgaaggatcgtta--tttgctacatggctgtgctcacaa 115
Query: 324 cccaactggaattgatcctactcctgaacagtgggaaatgattgctgatgtaattcaaga 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 cccaactggaattgatcctactcctgaacagtgggaaatgattgctgatgtaattcaaga 175
Query: 384 gaagaaccacattccattttttgatgttgcatatcagggatttgctagtggaagccttga 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gaagaaccacattccattttttgatgttgcatatcagggatttgctagtggaagccttga 235
Query: 444 tgcggatgcagcatcagtgaggttatttgctgcacgtggaatggagcttctagttgctca 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tgcggatgcagcatcagtgaggttatttgctgcacgtggaatggagcttctagttgctca 295
Query: 504 gtcttatagcaaaaatttgggtctatatgcagaaagaattggggcaatcaatgttgtatg 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gtcttatagcaaaaatttgggtctatatgcagaaagaattggggcaatcaatgttgtatg 355
Query: 564 ctcatcagcagatgccgcagcaagggttaagagccaactgaaaagacttgcacggccaat 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ctcatcagcagatgccgcagcaagggttaagagccaactgaaaagacttgcacggccaat 415
Query: 624 gtactcaaatcctcctgtacacggtgctaggattgttgccaat 666
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gtactcaaatcctcctgtacacggtgctaggattgttgccaat 458
>KJC_c12218
Length = 595
Score = 244 bits (123), Expect = 3e-64
Identities = 123/123 (100%)
Strand = Plus / Plus
Query: 57 ggttgcaacagtccaaggtctttcaggtactggttctcttcggttagctgcagctctcat 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ggttgcaacagtccaaggtctttcaggtactggttctcttcggttagctgcagctctcat 530
Query: 117 cgagcgatattttcctggggctaaagtcctgatatcatctccaacttggggtaatcacaa 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 cgagcgatattttcctggggctaaagtcctgatatcatctccaacttggggtaatcacaa 590
Query: 177 gaa 179
|||
Sbjct: 591 gaa 593