Jatropha Genome Database
- JcCA0308421.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0308421.20 + phase: 0 /partial
(630 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01333 1249 0.0
>KJC_c01333
Length = 2002
Score = 1249 bits (630), Expect = 0.0
Identities = 630/630 (100%)
Strand = Plus / Plus
Query: 1 cagcttcaagatctaacaaggaaagggtgcccacttgttggaattgctgatataacctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1116 cagcttcaagatctaacaaggaaagggtgcccacttgttggaattgctgatataacctgt 1175
Query: 61 gatgttggaggctctattgagtttattaatgaaaccacatcaattgactgtccattcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1176 gatgttggaggctctattgagtttattaatgaaaccacatcaattgactgtccattcttc 1235
Query: 121 aggtatgagcccctaaatgattcataccatcatgacatggacggtaatggtttgatatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1236 aggtatgagcccctaaatgattcataccatcatgacatggacggtaatggtttgatatgt 1295
Query: 181 tcttctgttgacattcttcctacagagttcgcaaaagaggcttctcaacattttggagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1296 tcttctgttgacattcttcctacagagttcgcaaaagaggcttctcaacattttggagac 1355
Query: 241 atactatcccaatttattggcagtctggtttctacaactgacattaccaagttaccttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1356 atactatcccaatttattggcagtctggtttctacaactgacattaccaagttaccttca 1415
Query: 301 catctacggagagcttgcatagcccatggaggagcacctactcccatgtttgaatatatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1416 catctacggagagcttgcatagcccatggaggagcacctactcccatgtttgaatatatt 1475
Query: 361 ccacgcatgcgaaactctgaatcagaagatatgcgagaaaatcctgtaaattcaaactca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1476 ccacgcatgcgaaactctgaatcagaagatatgcgagaaaatcctgtaaattcaaactca 1535
Query: 421 agcaagaagaaattcaatagctcggtgtctctgagtggccatctatttgatcagttttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1536 agcaagaagaaattcaatagctcggtgtctctgagtggccatctatttgatcagttttta 1595
Query: 481 attaacgaggcactggatattattgaagctgctggtggatcctttcacttagtcaagtgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1596 attaacgaggcactggatattattgaagctgctggtggatcctttcacttagtcaagtgt 1655
Query: 541 catgtgggtcagagtgctaatactccctcatactcagaacttgaagttggtgcggatgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1656 catgtgggtcagagtgctaatactccctcatactcagaacttgaagttggtgcggatgat 1715
Query: 601 agggaagttctggatcaaattattgactct 630
||||||||||||||||||||||||||||||
Sbjct: 1716 agggaagttctggatcaaattattgactct 1745