Jatropha Genome Database
- JcCA0307631.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0307631.10 + phase: 0
(1482 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04505 841 0.0
KJC_c03226 585 e-166
KJC_c00736 70 2e-11
>KJC_c04505
Length = 509
Score = 841 bits (424), Expect = 0.0
Identities = 461/468 (98%), Gaps = 4/468 (0%)
Strand = Plus / Minus
Query: 860 cttgtcttggaa-gcctt-cctaatttaacaactttacaagtgatagagctgggattagg 917
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cttgtcttggaaagcctttcctaatttaacaactttacaagtgatagagctgggattagg 443
Query: 918 gttagaatcctcgaaaaggcctttcatttgggtagtaagaggaggagattatagatcaaa 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gttagaatcctcgaaaaggcctttcatttgggtagtaagaggaggagattatagatcaaa 383
Query: 978 agaaatagagaaatgggtttcagagactgggttcgaagagagaataaaaggaagaggtct 1037
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 382 agaaatagagaaatgggtttcagagactgggttcgaagagagaataaa-ggaagaggtct 324
Query: 1038 tttcattagcggctgggcgccacaaatgctaatactgtcacacccagcaattggaggatt 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tttcattagcggctgggcgccacaaatgctaatactgtcacacccagcaattggaggatt 264
Query: 1098 tgtgacgcattgtggatggaattcaacattggaagcaataagctcaggtgtgccgatggc 1157
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 263 tgtgacgcattgtggatggaattcaatattggaagcaataagctcaggtgtgccgatggc 204
Query: 1158 tacatggccactttttgctgatcaatttattaatgagaagctagttattcaggtactgaa 1217
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tacatggccactttttgcagatcaatttattaatgagaagctagttattcaggtactgaa 144
Query: 1218 gattggtgtgagttttggggtcgaggttccagagaagttcggagaggaagggaagtttgg 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gattggtgtgagttttggggtcgaggttccagagaagttcggagaggaagggaagtttgg 84
Query: 1278 tctgttggtgaaaaaagaagatgttgtgagagctttggacaaattgat 1325
||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 83 tctgttggtga-aaaagaagatgttgtgagagctttggacaagttgat 37
>KJC_c03226
Length = 696
Score = 585 bits (295), Expect = e-166
Identities = 578/671 (86%), Gaps = 6/671 (0%)
Strand = Plus / Plus
Query: 6 ttcccaaagcaaccaacttcacttcgtcttgtttcctctactagcccaaggccatatgat 65
||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||
Sbjct: 32 ttcccaaagcaaccaacttcacttcatcttgtttcctctaatggcccaaggccatatgat 91
Query: 66 tccaatggtagatattgccaagctgttggcacaagaaggagcaatggtaagtataatcac 125
||||||||||||||||||||| || || |||| ||||| |||||| || |||||||| ||
Sbjct: 92 tccaatggtagatattgccaaactattagcacgagaagaagcaatagtgagtataataac 151
Query: 126 aacacctcaaaatgctgctaggcattcaacaattcttaccagagctatcaaatcaggcct 185
||||||||||||||||| ||| ||||||||| ||||||||||||| || |||||||||||
Sbjct: 152 aacacctcaaaatgctgatagacattcaacagttcttaccagagcaattaaatcaggcct 211
Query: 186 caaaatccaaattttcaaactccaaattccatttcaaaactatggcttacctgaaggatg 245
|||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 212 taaaatccaaattttcaaactccaatttccatttcaaaaatacggcttacctgaaggatg 271
Query: 246 tgaaaattttgacatgttaccttcattggacatgggcgaaaaaatgttcatggcagctaa 305
|||||||||||||||||||||||||||||| |||| | |||||||||||| |||| ||
Sbjct: 272 tgaaaattttgacatgttaccttcattggagatggcgcataaaatgttcatgacagcaaa 331
Query: 306 tgggcttcaaaagccagcagaagaattatttgaagaactaaaccctaagccaagctgcat 365
|| |||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 332 tgagcttgaaaagccagcagagaaattatttgaagaactaaaccccaagccaagctgcat 391
Query: 366 aatctctgatttgtttttgccatggacaattcacatagctagtaaatggaaggttccaag 425
||| || ||| ||| |||||| ||||||||| || | || ||||||||| | ||||| ||
Sbjct: 392 aatttcagatatgtgtttgccctggacaattaacttggcaagtaaatgggaagttcctag 451
Query: 426 aatttcatttaacggcttttgctgttttactatgttatgcacgcataatatttacaattc 485
||||||||| || || |||||||||||| || |||||| | || ||| ||| |||
Sbjct: 452 aatttcattcaatggattttgctgtttttgtacgttatggtcacactgtatgcacagttc 511
Query: 486 caacattttagagaatataacatcagaaaatgaattttttgttgttcctggattgcctca 545
||| ||||| |||| |||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 512 caagattttggagactataacatcagaaaatgaatattttgtggttcctggattgcctca 571
Query: 546 gactattgagatcaccgaaagtcagctgcccgaatcggctgtaaagaactggaccgaaga 605
|||||| || | || ||||||| || ||| | | || ||| ||| | |||||
Sbjct: 572 aactattcagtttactaaaagtcaacttcccttaccaact---aaggacttg---gaaga 625
Query: 606 gctccttaatcaaattcttcaagctgaaaaggaaagctgtggatttattataaatacatt 665
| || |||||||||||||||||||| |||| ||||| ||||||||||||||| |||||
Sbjct: 626 gtaccaaaatcaaattcttcaagctgagaaggcaagctatggatttattataaacacatt 685
Query: 666 tgaagagttag 676
|||||||||||
Sbjct: 686 tgaagagttag 696
>KJC_c00736
Length = 1204
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 1083 agcaattggaggatttgtgacgcattgtggatggaattcaaca 1125
|||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 400 agcagttggaggatttgtgactcattgtggatggaattcaaca 358