Jatropha Genome Database
- JcCA0307381.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0307381.20 - phase: 0
(552 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06990 1043 0.0
>KJC_c06990
Length = 1095
Score = 1043 bits (526), Expect = 0.0
Identities = 536/538 (99%), Gaps = 1/538 (0%)
Strand = Plus / Minus
Query: 8 aggagcatccaagtttgacaaaggctgaaaggaagaagatatgtggactaatggatgtca 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 aggagcatccaagtttgacaaaggctgaaaggaagaagatatgtggactaatggatgtca 479
Query: 68 aaaaattcacagtgaatgcatccatgcatgctgcacagaatgagcggctcccacttcgtg 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aaaaattcacagtgaatgcatccatgcatgctgcacagaatgagcggctcccacttcgtg 419
Query: 128 tcgtggtgcaagttctcttttttgagcaggttagagcaagtgctggtgttcaagctctca 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tcgtggtgcaagttctcttttttgagcaggttagagcaagtgctggtgttcaagctctca 359
Query: 188 acaacgttccccgggatgctacaaattccacgacaaacacagatgaagaatgggaaaaag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 acaacgttccccgggatgctacaaattccacgacaaacacagatgaagaatgggaaaaag 299
Query: 248 cagcagcagatgataacaaatctgtcaagaagcagatgagtcaactgaagataaaagatg 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 cagcagcagatgataacaaatctgtcaagaagcagatgagtcaactgaagataaaagatg 239
Query: 308 aagaacttcagaagactggaaaaatgatgaagaaaaacagcaagaacagtaaaagcggta 367
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 238 aagaacttcagaagactggaaaaacgatgaagaaaaacagcaagaacagtaaaagcggta 179
Query: 368 tacagttactgccatctcgatcaaggaggatatttgacaagttgtgggttgtgggaaaag 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tacagttactgccatctcgatcaaggaggatatttgacaagttgtgggttgtgggaaaag 119
Query: 428 gtcatggtggagagaacagaagctcagagacatctgggagttcacaaagcccaacttcaa 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gtcatggtggagagaacagaagctcagagacatctgggagttcacaaagcccaacttcaa 59
Query: 488 tggttccaggggacacc-aaatcctctggctcatcttcaagacacaggagacattcca 544
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 tggttccaggggacaccgaaatcctctggctcatcttcaagacacaggagacattcca 1