Jatropha Genome Database
- JcCA0307051.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0307051.30 - phase: 0
(732 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00404 1191 0.0
KJC_c00356 127 4e-29
KJC_s14237 54 5e-07
>KJC_c00404
Length = 878
Score = 1191 bits (601), Expect = 0.0
Identities = 644/663 (97%), Gaps = 19/663 (2%)
Strand = Plus / Minus
Query: 89 ggtatctccagagactccatgcacaagaggcgtgccactggtggcaaaaagaaggcctgg 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 ggtatctccagagactccatgcacaagaggcgtgccactggtggcaaaaagaaggcctgg 790
Query: 149 agaaagaagagaaa-------------------cctgcaaataccaagctttcaagcaac 189
|||||||||||||| |||||||||||||||||||||||||||
Sbjct: 789 agaaagaagagaaagtatgagcttggtcgtcagcctgcaaataccaagctttcaagcaac 730
Query: 190 aagacagtaagaaggattcgtgttagaggaggcaatgttaagtggagagccctgagattg 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 aagacagtaagaaggattcgtgttagaggaggcaatgttaagtggagagccctgagattg 670
Query: 250 gacacaggaaattattcctggggtagtgaggctgttacccgcaagactcgtatccttgat 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gacacaggaaattattcctggggtagtgaggctgttacccgcaagactcgtatccttgat 610
Query: 310 gtggtttataatgcctccaacaacgaacttgttaggacccaaactttggtgaagagtgct 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gtggtttataatgcctccaacaacgaacttgttaggacccaaactttggtgaagagtgct 550
Query: 370 attgttcaggttgatgctgctccatttaagcaatggtatctccagcactatggtgttgac 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 attgttcaggttgatgctgctccatttaagcaatggtatctccagcactatggtgttgac 490
Query: 430 ataggcaggaagaagaagactgttgctaagaaggaaactactgaggaaggggatgctgct 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ataggcaggaagaagaagactgttgctaagaaggaaactactgaggaaggggatgctgct 430
Query: 490 gctcctgccacggcagaggaagctaagaagagcaaccatgtacagaggaagcttgagaaa 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gctcctgccacggcagaggaagctaagaagagcaaccatgtacagaggaagcttgagaaa 370
Query: 550 cgccagaaggatcgtaagcttgaccctcacattgaagagcaatttggagctggaagattg 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cgccagaaggatcgtaagcttgaccctcacattgaagagcaatttggagctggaagattg 310
Query: 610 ttggcctgcatctcatctcgacctggtcaatgtggcagagctgatgggtacatattggag 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttggcctgcatctcatctcgacctggtcaatgtggcagagctgatgggtacatattggag 250
Query: 670 ggtaaggaacttgagttctatatgaagaagatccaaaagaagaagggcaagggtgctgcc 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ggtaaggaacttgagttctatatgaagaagatccaaaagaagaagggcaagggtgctgcc 190
Query: 730 taa 732
|||
Sbjct: 189 taa 187
>KJC_c00356
Length = 959
Score = 127 bits (64), Expect = 4e-29
Identities = 211/260 (81%)
Strand = Plus / Minus
Query: 187 aacaagacagtaagaaggattcgtgttagaggaggcaatgttaagtggagagccctgaga 246
||||||||||| || || ||| | |||||||| || ||||| |||||| | || ||||
Sbjct: 776 aacaagacagtcaggagaattagggttagaggtggaaatgtgaagtggcgtgctttgagg 717
Query: 247 ttggacacaggaaattattcctggggtagtgaggctgttacccgcaagactcgtatcctt 306
| || || ||||| || |||||||| |||||||||||||| | ||||| | || |||
Sbjct: 716 cttgatactggaaactactcctggggaagtgaggctgttactagaaagaccagaattctt 657
Query: 307 gatgtggtttataatgcctccaacaacgaacttgttaggacccaaactttggtgaagagt 366
|||||||| || ||||| || ||||| || || ||| | || ||||| ||||||||||||
Sbjct: 656 gatgtggtgtacaatgcatctaacaatgagctggttcgtactcaaaccttggtgaagagt 597
Query: 367 gctattgttcaggttgatgctgctccatttaagcaatggtatctccagcactatggtgtt 426
|| ||||| |||||||||||||| |||||||| || |||||||| ||||||||||| |||
Sbjct: 596 gccattgtccaggttgatgctgcaccatttaaacagtggtatcttcagcactatggagtt 537
Query: 427 gacataggcaggaagaagaa 446
|| || ||| | ||||||||
Sbjct: 536 gatattggccgcaagaagaa 517
Score = 105 bits (53), Expect = 1e-22
Identities = 95/109 (87%)
Strand = Plus / Minus
Query: 619 atctcatctcgacctggtcaatgtggcagagctgatgggtacatattggagggtaaggaa 678
|||||||| || |||||||| |||||| | ||||||||||| || |||||||||||||
Sbjct: 356 atctcatcacgccctggtcagtgtggccgtgctgatgggtatattctggagggtaaggag 297
Query: 679 cttgagttctatatgaagaagatccaaaagaagaagggcaagggtgctg 727
|| |||||||| |||||||||||||| | ||||||||||||||| ||||
Sbjct: 296 ctggagttctacatgaagaagatccagaggaagaagggcaagggagctg 248
>KJC_s14237
Length = 424
Score = 54.0 bits (27), Expect = 5e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 384 tgctgctccatttaagcaatggtatctccagcactatggtgttgacataggcaggaagaa 443
|||||| |||||||| || |||||||| ||||||||||| ||||| || ||| | |||||
Sbjct: 1 tgctgcaccatttaaacagtggtatcttcagcactatggagttgatattggccgcaagaa 60
Query: 444 gaa 446
|||
Sbjct: 61 gaa 63