Jatropha Genome Database
- JcCA0305581.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0305581.10 - phase: 0
(1758 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05700 272 3e-72
KJC_c06062 182 2e-45
>KJC_c05700
Length = 608
Score = 272 bits (137), Expect = 3e-72
Identities = 418/509 (82%), Gaps = 2/509 (0%)
Strand = Plus / Plus
Query: 580 gattccgtgagagccataaatctccacgcttatgatagcttaaagttattctatgatatt 639
||||| || ||||||||||||||||| | ||| ||| | | ||||||| ||||||| ||
Sbjct: 74 gattctgttagagccataaatctccatacgtataatacccttaagttatactatgatctt 133
Query: 640 ggagctggagaacctttggagtacactttaatttcaatttgggataaggtagcgacaact 699
| || ||||||||| | || || ||||||| |||||| ||| ||||| |||| |||| |
Sbjct: 134 agcgcaggagaacctctagaatatactttaacttcaatatggaataagttagccacaagt 193
Query: 700 tctagctttttccaaaggactgaaatggtaaaagagtttaacagctgtaatttgtggagg 759
|| |||||| ||||||||||| || ||||||||||||| || | ||| |||||| |
Sbjct: 194 tcgagctttgaacaaaggactgagctgataaaagagtttaataggtcaaatgtgtggaag 253
Query: 760 aaaagaggtgtttctcgaatacctattgtgcatgaagtgatgctgaggccaactccagga 819
||||||||| |||||||||||||| | ||| ||||||| || |||||| | |||
Sbjct: 254 aaaagaggtatttctcgaatacctgtagtgtatgaagtcggaacaagaccaactgctgga 313
Query: 820 aaagtaagcattttaagtgatggatctgttgctgttgaagttgggggaatagagctgggc 879
||||| |||||| ||| ||||| ||| ||| |||||||||||| ||| | || ||| |
Sbjct: 314 aaagtgagcattctaaacgatgggtctattgttgttgaagttggaggacttgaattgg-c 372
Query: 880 caggggctctggacaaaagtaaaacagatggttgcatttgctcttggttcaatcaaatgt 939
||||| ||||||||||| ||||||||||||||||| ||||||||| |||| |||||||||
Sbjct: 373 cagggcctctggacaaaggtaaaacagatggttgcttttgctcttagttccatcaaatgt 432
Query: 940 gccggagcaggagacctctttgataaagtacgagttgtacagtctgatactttgagttta 999
| ||||||||||||||||| |||||||| ||||| |||| |||||||| |||||||||
Sbjct: 433 gatggagcaggagacctcttggataaagttcgagtcatacaatctgataccttgagttta 492
Query: 1000 attcaaggtgggtttacctctgggagcactacatctgagtccagctgtgaagcagttaga 1059
| |||||| ||||| || ||| ||||||||||||||||| ||||||| ||||||||||
Sbjct: 493 actcaaggggggttgactggtggcagcactacatctgagtcgagctgtg-agcagttaga 551
Query: 1060 atgtgctgtaaagttttggttgacagact 1088
| |||||||| ||| ||||||| |||||
Sbjct: 552 ctttgctgtaatgttctggttgagagact 580
>KJC_c06062
Length = 578
Score = 182 bits (92), Expect = 2e-45
Identities = 224/268 (83%)
Strand = Plus / Minus
Query: 1 atggagaatcaaactgctcttgccatccctgatgaagacaaatgcataatggtttacagt 60
||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||
Sbjct: 268 atggagaatcaaactgctcttgctgtccctgatgaagacaattgcatggtggtttacagt 209
Query: 61 tcaattcaatgccctgagtatggacatgctgtgattgcaagatgtcttggggttcctgaa 120
|| | |||| ||| || |||| ||| ||| ||||||| |||||| || ||||||||
Sbjct: 208 tctaatcaagcccccgaatatgcacacactgcaattgcaaaatgtctcggtgttcctgag 149
Query: 121 cataatgtgcgagtaattgcaagaagggttggaggaggctttggcggaaaggccataaaa 180
|| |||||||| || || |||| |||||||||||||| ||||| ||||||| | |||||
Sbjct: 148 cacaatgtgcgtgtgcttacaaggagggttggaggaggttttggtggaaagggcttaaaa 89
Query: 181 gccatgcctgttgcaacagcttgtgcacttgcagcattcaagttacagcgccctgtcagg 240
|||||||||||||| |||| ||||||||||||||| ||||||||| || ||||| |||
Sbjct: 88 gccatgcctgttgctacagtttgtgcacttgcagcgcacaagttacaacgtcctgtgagg 29
Query: 241 atgtatctcagtcgcaagaccgatatga 268
| ||||||| |||| | || |||||||
Sbjct: 28 ctatatctcaatcgccacactgatatga 1