Jatropha Genome Database
- JcCA0305361.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0305361.10 - phase: 0 /partial
(1503 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c10771 1015 0.0
KJC_c09985 589 e-168
KJC_c03844 86 3e-16
>KJC_c10771
Length = 570
Score = 1015 bits (512), Expect = 0.0
Identities = 526/528 (99%), Gaps = 2/528 (0%)
Strand = Plus / Minus
Query: 978 ccagcagacagggagcaccaatggtgaa-gtggtatccgattcccaaaaatttcagcggt 1036
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 570 ccagcagacagggagcaccaatggtgaaagtggtatccgattcccaaaaatttcagcggt 511
Query: 1037 tcatgatttatgtccatgcaaagggaatgattgtggatgacgagtatgccattatcggat 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tcatgatttatgtccatgcaaagggaatgattgtggatgacgagtatgccattatcggat 451
Query: 1097 ctgccaatattaaccagagatccatggctggttcaaaagacacggagatagctatgggtg 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ctgccaatattaaccagagatccatggctggttcaaaagacacggagatagctatgggtg 391
Query: 1157 catatcaaccccattacacatgggctgcgaagaaaaagcatccacatgggcaggtatatg 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 catatcaaccccattacacatgggctgcgaagaaaaagcatccacatgggcaggtatatg 331
Query: 1217 gacatagaatgtcactgtgggctgagcatcttggcggggtccaggaattgttcatggaac 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gacatagaatgtcactgtgggctgagcatcttggcggggtccaggaattgttcatggaac 271
Query: 1277 ctgagagtttggaatgtgtgaggacagtaaataaaattgctgaagacaactggaagaaat 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ctgagagtttggaatgtgtgaggacagtaaataaaattgctgaagacaactggaagaaat 211
Query: 1337 tcacagatcccgatttcaaagtattgcagggccatcttctcaggtatcctctggaagtcg 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tcacagatcccgatttcaaagtattgcagggccatcttctcaggtatcctctggaagtcg 151
Query: 1397 atgctcgtgggaaagtaggtgctttacctggattcgagaacttcccagatgttgggggt- 1455
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 atgctcgtgggaaagtaggtgctttacctggattcgagaacttcccagatgttgggggta 91
Query: 1456 aaggtaattggagctcattccctgaaagttcctgatattttaacgaca 1503
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 aaggtaattggagctcattccctgaaagttcctgatattttaacgaca 43
>KJC_c09985
Length = 518
Score = 589 bits (297), Expect = e-168
Identities = 454/505 (89%), Gaps = 1/505 (0%)
Strand = Plus / Minus
Query: 704 caggagttgataat-ctgatcccaatggagttggcattaaaggttgccagtaaaattaga 762
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 506 caggagttgataatactgatcccaatggagttggcactaaaggttgccagtaaaattaga 447
Query: 763 gctaatgaaagatttgcagtgtatattgtgctgccaatgtggcctgagggtgatccaaag 822
|| ||||| ||||||||||||||||||||| | ||||||||||||||||||| ||||
Sbjct: 446 gccaatgagagatttgcagtgtatattgtggtcccaatgtggcctgagggtgtcccaaca 387
Query: 823 tctgagacaatgcaagaaattctctattggcagagccagacaatgcaaatgatgtacagt 882
|||| | |||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 386 tctggccccatgcaagaaattctatattggcagagccagacaatgcaaatgatgtacaat 327
Query: 883 atagtagcaaatgaaattgaatcaatgcaacttgtagattcacatcctagagattacctt 942
|| |||||| | |||||| |||||||||||||||| ||||||||||| | |||||||||
Sbjct: 326 atcgtagcacaggaaattaaatcaatgcaacttgttgattcacatcccaaagattacctc 267
Query: 943 aatttctattgccttggtaaacgggaagaaaatgcccagcagacagggagcaccaatggt 1002
||||||||||||||||| ||||| ||||||||| |||||||||| | || || ||| |
Sbjct: 266 aatttctattgccttggaaaacgagaagaaaatacccagcagactgtgataactgatgat 207
Query: 1003 gaagtggtatccgattcccaaaaatttcagcggttcatgatttatgtccatgcaaaggga 1062
||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 206 gaaatggtatccgattctcaaaaatttcagcggttcacgatttatgtccatgcaaaggga 147
Query: 1063 atgattgtggatgacgagtatgccattatcggatctgccaatattaaccagagatccatg 1122
|| ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 146 ataattgtggatgatgagtatgccattattggatctgccaatatcaaccagagatccatg 87
Query: 1123 gctggttcaaaagacacggagatagctatgggtgcatatcaaccccattacacatgggct 1182
|||||| |||||||||| |||||||| ||||||||||||||||||||| | || ||||||
Sbjct: 86 gctggtacaaaagacactgagatagcaatgggtgcatatcaaccccatcaaacttgggct 27
Query: 1183 gcgaagaaaaagcatccacatgggc 1207
|| ||||| || ||||||| |||||
Sbjct: 26 gcaaagaagaaacatccacgtgggc 2
>KJC_c03844
Length = 1123
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 5 agacgcatgacgaagaaacccggaagtttttcaaacattcatctgtcatttgtgtgttgg 64
|||||||||| ||||| ||| ||||||||| ||||||||||| || |||||||||||||
Sbjct: 148 agacgcatgatgaagataccaggaagttttctaaacattcatcggtgatttgtgtgttgg 89
Query: 65 cgcctcgctat 75
|||||||||||
Sbjct: 88 cgcctcgctat 78