Jatropha Genome Database
- JcCA0304441.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0304441.20 - phase: 0
(960 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c11548 1076 0.0
KJC_c05724 58 4e-08
>KJC_c11548
Length = 785
Score = 1076 bits (543), Expect = 0.0
Identities = 550/551 (99%), Gaps = 1/551 (0%)
Strand = Plus / Minus
Query: 392 ctatttcaaatgctattactaatctctgtgttactattttt-gggcaactgtggagattg 450
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 782 ctatttcaaatgctattactaatctctgtgttactattttttgggcaactgtggagattg 723
Query: 451 gagccattggcaccagagaagaaatcaatgtggagaagagagatggagtggcttctttgt 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gagccattggcaccagagaagaaatcaatgtggagaagagagatggagtggcttctttgt 663
Query: 511 gttggtgatcacattgtggaattaataccctcttggcaaacatttcctgatggtagtaag 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gttggtgatcacattgtggaattaataccctcttggcaaacatttcctgatggtagtaag 603
Query: 571 cttgaggtaatgacttgcaggccaagatcagacctttttatcaatctcccagctctccgt 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cttgaggtaatgacttgcaggccaagatcagacctttttatcaatctcccagctctccgt 543
Query: 631 aaactagacaatatgcttcttgaaatattagatagctttgtcaatgcagagttctggtat 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aaactagacaatatgcttcttgaaatattagatagctttgtcaatgcagagttctggtat 483
Query: 691 gttgatcaaggcattgtagctccagatgcagatggttcagcttctttcagaaagacaatt 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gttgatcaaggcattgtagctccagatgcagatggttcagcttctttcagaaagacaatt 423
Query: 751 cagagacaagaggagaagtggtggctgcctgtaccccgtatccccgctggtggcctaagt 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cagagacaagaggagaagtggtggctgcctgtaccccgtatccccgctggtggcctaagt 363
Query: 811 gataattcaagaaagcagttgaaccatacacgcgaatgcactaatcaaatactaaaagct 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gataattcaagaaagcagttgaaccatacacgcgaatgcactaatcaaatactaaaagct 303
Query: 871 gcaatggctatcaatagtattgctttagctgaaatggaagttcctgactcatacatggaa 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcaatggctatcaatagtattgctttagctgaaatggaagttcctgactcatacatggaa 243
Query: 931 gcacttccaaa 941
|||||||||||
Sbjct: 242 gcacttccaaa 232
>KJC_c05724
Length = 796
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 439 ctgtggagattggagccattggcaccagagaagaaatcaatgtggagaagagagatggag 498
|||||||| || |||||||| || ||| | ||||| ||||||||| | ||||||||||||
Sbjct: 380 ctgtggaggttagagccattagccccacaaaagaagtcaatgtggcgcagagagatggag 439
Query: 499 tggct 503
|||||
Sbjct: 440 tggct 444