Jatropha Genome Database
- JcCA0304061.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0304061.10 - phase: 0 /pseudo
(717 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01983 1265 0.0
>KJC_c01983
Length = 836
Score = 1265 bits (638), Expect = 0.0
Identities = 659/662 (99%), Gaps = 3/662 (0%)
Strand = Plus / Minus
Query: 1 atggctctgttacggtttttgctgtttgctttcatcaacatttccctgttttcgaacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 atggctctgttacggtttttgctgtttgctttcatcaacatttccctgttttcgaacatt 709
Query: 61 tgttttgccgcagacccaactgtctcttatgaattgagactctcttatataaccgtctct 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 tgttttgccgcagacc-aactgtctcttatgaattgagactctcttatataaccgtctct 650
Query: 121 cctctgggtgttcctcagcaggtcattggaataaataaaaaatttcctggtcctgttata 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 649 cctctgggtgttcctcagcaggtcattggaataaataaaaa-tttcctggtcctgttata 591
Query: 181 aatgctactactaactatgttgttattgttaatgtatttaatgagttggatgagaatctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aatgctactactaactatgttgttattgttaatgtatttaatgagttggatgagaatctc 531
Query: 241 ctaatgacttggcctgggatccaaatgcgacgtgattcatgggaggatggtgttcgtggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ctaatgacttggcctgggatccaaatgcgacgtgattcatgggaggatggtgttcgtggc 471
Query: 301 accaattgtccaatccctcccaaagggaattatacttataattttcaagtcaaggatcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 accaattgtccaatccctcccaaagggaattatacttataattttcaagtcaaggatcag 411
Query: 361 attgggagctttttctactttccatccttgaatcttcaaagagcatctggcggctttggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 attgggagctttttctactttccatccttgaatcttcaaagagcatctggcggctttggt 351
Query: 421 cccttcatcattaataatcgagcagttatctcaattccttttccacagccagatggggat 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 350 cccttcatcattaataatcgagcagttatctcaatt-cttttccacagccagatggggat 292
Query: 481 attatccttctgattggtgactggtatatacggaaccatacggcactgaggactgacctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 attatccttctgattggtgactggtatatacggaaccatacggcactgaggactgacctt 232
Query: 541 gattccgggaaagaccttggaatgccagatggtgttgtaattaatgggaaaggaccttac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gattccgggaaagaccttggaatgccagatggtgttgtaattaatgggaaaggaccttac 172
Query: 601 agatacaacacaactcttgtgtctgatggtattgaatacgaaaccattcaagttgatcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 agatacaacacaactcttgtgtctgatggtattgaatacgaaaccattcaagttgatcca 112
Query: 661 gg 662
||
Sbjct: 111 gg 110