Jatropha Genome Database

JcCA0302221.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0302221.20 - phase: 0 /partial
         (507 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00616                                                            991   0.0  

>KJC_c00616 
          Length = 2026

 Score =  991 bits (500), Expect = 0.0
 Identities = 500/500 (100%)
 Strand = Plus / Plus

                                                                        
Query: 8    agagagttactgatgctgacctgttagcattagtatcagatgaagtttttcagccagaaa 67
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 agagagttactgatgctgacctgttagcattagtatcagatgaagtttttcagccagaaa 1361

                                                                        
Query: 68   ttgtatggcagcttggtgatctgcagattacttgcggaacacttggtctctctactgcaa 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 ttgtatggcagcttggtgatctgcagattacttgcggaacacttggtctctctactgcaa 1421

                                                                        
Query: 128  ctgttaagctcattgatgccaatggtgaacagcacattgcatgttcagttggaactgggc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 ctgttaagctcattgatgccaatggtgaacagcacattgcatgttcagttggaactgggc 1481

                                                                        
Query: 188  cagtagatgcagcatacaaggcagttgatctcattgtgaaggaacctgttgaactccttg 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1482 cagtagatgcagcatacaaggcagttgatctcattgtgaaggaacctgttgaactccttg 1541

                                                                        
Query: 248  aatactcaatgactgctgttactggaggcattgatgctatagccacaacccgagttttaa 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1542 aatactcaatgactgctgttactggaggcattgatgctatagccacaacccgagttttaa 1601

                                                                        
Query: 308  tttgtggtgacaaccataaaattgatgctataacaggtgaaccatctcgacggacattca 367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1602 tttgtggtgacaaccataaaattgatgctataacaggtgaaccatctcgacggacattca 1661

                                                                        
Query: 368  gtggatctggtgctggaatggacattgttgtttcaagtgtgaaggcctatattggtgcat 427
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1662 gtggatctggtgctggaatggacattgttgtttcaagtgtgaaggcctatattggtgcat 1721

                                                                        
Query: 428  tgaataagatgttagctgttaatagccagcagttgtcgacgacaaaaacggtttctacag 487
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1722 tgaataagatgttagctgttaatagccagcagttgtcgacgacaaaaacggtttctacag 1781

                                
Query: 488  ttaggactccagtctctgca 507
            ||||||||||||||||||||
Sbjct: 1782 ttaggactccagtctctgca 1801