Jatropha Genome Database

JcCA0302081.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0302081.10 + phase: 1 /partial
         (164 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05308                                                            325   2e-89

>KJC_c05308 
          Length = 731

 Score =  325 bits (164), Expect = 2e-89
 Identities = 164/164 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccagaaaatccccatgtggcgaaggaaccaacacatgggacagatttgagctccgtgtcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ccagaaaatccccatgtggcgaaggaaccaacacatgggacagatttgagctccgtgtcc 336

                                                                       
Query: 61  acaagcgtgttattgacctgttcagttcacctgaggtggtcaaacaaatcacttccatta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 acaagcgtgttattgacctgttcagttcacctgaggtggtcaaacaaatcacttccatta 396

                                                       
Query: 121 caattgaacctggtgttgaggtggaagttacaattgcagattca 164
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 caattgaacctggtgttgaggtggaagttacaattgcagattca 440