Jatropha Genome Database

JcCA0301461.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0301461.10 + phase: 0 /partial
         (614 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c08336                                                            232   8e-61

>KJC_c08336 
          Length = 462

 Score =  232 bits (117), Expect = 8e-61
 Identities = 117/117 (100%)
 Strand = Plus / Minus

                                                                       
Query: 498 tgccgatgtctattactctccagaccctaatcaaattccatctgctggtgattttagacc 557
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tgccgatgtctattactctccagaccctaatcaaattccatctgctggtgattttagacc 403

                                                                    
Query: 558 cgaagttcgcgacccgacactcgaaataatccagtttctacattcaaacgatgcacc 614
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 cgaagttcgcgacccgacactcgaaataatccagtttctacattcaaacgatgcacc 346