Jatropha Genome Database
- JcCA0300241.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0300241.10 - phase: 0
(960 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00700 1679 0.0
KJC_c00513 129 1e-29
>KJC_c00700
Length = 1053
Score = 1679 bits (847), Expect = 0.0
Identities = 932/959 (97%), Gaps = 1/959 (0%)
Strand = Plus / Minus
Query: 1 atggagtttccagtgattaacttggagaaacttaatggtggcgagagagcagtaaccatg 60
||||||||||| ||||||||| |||||||||||||||||| ||||||||||| ||||||
Sbjct: 992 atggagtttcctgtgattaacatggagaaacttaatggtgacgagagagcagccaccatg 933
Query: 61 gctaagatcaaagatgcctgtgaaaactggggcttctttgagcttctgaaccatggaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 gctaagatcaaagatgcctgtgaaaactggggcttctttgagcttctgaaccatggaata 873
Query: 121 gctccagagtttcttgacacagttgaaagattgacaaaagctcactacagaaaatgcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 gctccagagtttcttgacacagttgaaagattgacaaaagctcactacagaaaatgcatg 813
Query: 181 gagcaaagatttaaagaaatggtcgcgagcaaaggcctcgacgcaacccaaactgagatc 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 gagcaaagatttaa-gaaatggtcgcgagcaaaggcctcgacgcaacccaaactgagatc 754
Query: 241 aaagatatggattgggaaagcactttcttccttcgccatcttcctcagtcaaacattgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 aaagatatggattgggaaagcactttcttccttcgccatcttcctcagtcaaacattgct 694
Query: 301 gaaattcccgatctcgatgatgaatacaggaaggtgatgaaggaatttgcagcccagtta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gaaattcccgatctcgatgatgaatacaggaaggtgatgaaggaatttgcagcccagtta 634
Query: 361 gagaaactggcagaggagttgctagatttgctgtgtgagaatcttggtcttgagaaaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gagaaactggcagaggagttgctagatttgctgtgtgagaatcttggtcttgagaaaggg 574
Query: 421 tacctaaagaaggcgttttacgggtcaagtggatcgccaacctttgggacaaaggttagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tacctaaagaaggcgttttacgggtcaagtggatcgccaacctttgggacaaaggttagc 514
Query: 481 aactacccaccatgccctaaaccagacttgatcaaaggactcagggcccacacagatgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aactacccaccatgccctaaaccagacttgatcaaaggactcagggcccacacagatgca 454
Query: 541 ggtggcatcatcttgttgtttcaagatgataaggtcagtggccttcaactcctcaaagat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ggtggcatcatcttgttgtttcaagatgataaggtcagtggccttcaactcctcaaagat 394
Query: 601 ggccactggattgatgtccctcctatgcgtcattccattgtcatcaacctgggcgaccaa 660
||||||||| ||||||||||||| |||||||| ||||||||||||||||| || ||||||
Sbjct: 393 ggccactgggttgatgtccctccgatgcgtcactccattgtcatcaaccttggagaccaa 334
Query: 661 attgaggtaattacaaatggaaagtacaagagtgtagagcacagagtggtggctcaaaca 720
||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 333 attgaggtaataacaaatgggaaatacaagagtgtagagcacagagtggtggctcaaaca 274
Query: 721 gatggaacaagaatgtcgatagcttcattttacaacccaggaagtgatgcagttatttat 780
||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||
Sbjct: 273 gatggaacaagaatgtcaatagcttcattttacaacccaggaagtgatgcagtgatatat 214
Query: 781 ccagctccagctttgctggagaaagaagcagaagagaaaaaacaagtttacccaaaattt 840
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 213 ccagcaccagctttgctggagaaagaagcagaagagaaaaaacaaatttacccaaaattt 154
Query: 841 gttttcgaagattatatgaagatttatgctgggctgaagtttcaggctaaggaaccaaga 900
||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 153 gtttttgaagattacatgaagatttacgctgggctgaagtttcaggctaaggaaccaaga 94
Query: 901 tttgaagctatgaaggctgagggaaataatgttaatctgggtccaattgctacagctta 959
||||||||||||||||||| | || |||||||||| ||||||||||||||||||||||
Sbjct: 93 tttgaagctatgaaggctgtagaaactaatgttaatttgggtccaattgctacagctta 35
>KJC_c00513
Length = 1140
Score = 129 bits (65), Expect = 1e-29
Identities = 559/723 (77%), Gaps = 3/723 (0%)
Strand = Plus / Minus
Query: 66 gatcaaagatgcctgtgaaaactggggcttctttgagcttctgaaccatggaatagctcc 125
||||||||||||||| || || ||||||||||||||| | |||||||||||||| |||
Sbjct: 1022 gatcaaagatgcctgcgagaattggggcttctttgagttggtgaaccatggaatatctca 963
Query: 126 agagtttcttgacacagttgaaagattgacaaaagctcactacagaaaatgcatggagca 185
||| | | ||||| || |||||| ||||||| | ||||||||||| || |||||| |
Sbjct: 962 tgagctgatggacactgtggaaagactgacaaaggaacactacagaaagtgtatggagga 903
Query: 186 aagatttaaagaaatggtcgcgagcaaaggcctcgacgcaacccaaactgagatcaaaga 245
||| || || || ||||| || || || || || || || | | |||| ||||| ||
Sbjct: 902 aaggttcaaggagatggtagccagtaagggtcttgaggctgtcgagtctgaaatcaatga 843
Query: 246 tatggattgggaaagcactttcttccttcgccatcttcctcagtcaaacattgctgaaat 305
|||| ||||||||||| |||||| | ||||| |||||| || ||| | || |||||
Sbjct: 842 cttggactgggaaagcaccttcttcttgcgccaccttcctgtctccaacctggcagaaat 783
Query: 306 tcccgatctcgatgatgaatacaggaaggtgatgaaggaatttgcagcccagttagagaa 365
||| | || || | || ||||||||| |||||||| |||||||| | || |||||
Sbjct: 782 tcctaaccttcatcaagattacaggaagacaatgaaggagtttgcagcagaattggagaa 723
Query: 366 actggcagaggagttgctagatttgctgtgtgagaatcttggtcttgagaaagggtacct 425
| |||||||| | || || |||||||| ||||||||||| | ||||| ||||||||
Sbjct: 722 aatggcagagcttctactggagttgctgtgcgagaatcttggattagagaaggggtacct 663
Query: 426 aaagaaggcgttttacgggtcaagtggatcgccaacctttgggacaaaggttagcaacta 485
|| |||| || || || |||| ||| |||||||| ||||| || || ||||||||
Sbjct: 662 gaaaaaggtattctatggatcaaaagga---ccaaccttcgggactaaagtcagcaacta 606
Query: 486 cccaccatgccctaaaccagacttgatcaaaggactcagggcccacacagatgcaggtgg 545
|| |||||||| || || || | || || || || |||||||||||||||||||||||
Sbjct: 605 tcctccatgcccaaagcctgaacttataaaggggctgagggcccacacagatgcaggtgg 546
Query: 546 catcatcttgttgtttcaagatgataaggtcagtggccttcaactcctcaaagatggcca 605
|||||| || | |||||||| |||||||| ||||| || || || ||||| ||||||||
Sbjct: 545 catcattttactatttcaagacgataaggtgagtggtctccagctgctcaaggatggcca 486
Query: 606 ctggattgatgtccctcctatgcgtcattccattgtcatcaacctgggcgaccaaattga 665
||| |||| || ||||| ||| || || |||||| ||||| | ||||||||| ||||
Sbjct: 485 atgggttgacgtgcctcccatgaaacactctattgtcgtcaacttaggcgaccaacttga 426
Query: 666 ggtaattacaaatggaaagtacaagagtgtagagcacagagtggtggctcaaacagatgg 725
||| || || || || || ||||||||||| |||| | ||| | ||||| | || ||
Sbjct: 425 ggtgatcacgaacgggaaatacaagagtgtgatgcaccgggtgattgctcagaaggacgg 366
Query: 726 aacaagaatgtcgatagcttcattttacaacccaggaagtgatgcagttatttatccagc 785
|| |||||||||||||| || || || |||||||| || |||||||| || ||||||||
Sbjct: 365 cacgagaatgtcgatagcatcgttctataacccagggagcgatgcagtaatatatccagc 306
Query: 786 tcc 788
|||
Sbjct: 305 tcc 303