Jatropha Genome Database
- JcCA0299231.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0299231.10 - phase: 0 /partial
(1695 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04498 1231 0.0
>KJC_c04498
Length = 653
Score = 1231 bits (621), Expect = 0.0
Identities = 641/645 (99%), Gaps = 2/645 (0%)
Strand = Plus / Plus
Query: 393 ggaggcattgagatcttgtgtaaaggctattacattttgttccactgagagtcaaggaga 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaggcattgagatcttgtgtaaaggctattacattttgttccactgagagtcaaggaga 60
Query: 453 gcttaaagattttgcctgtaataaattaaagaatcttgaagatgagctaattgctaaact 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcttaaagattttgcctgtaataaattaaagaatcttgaagatgagctaattgctaaact 120
Query: 513 taaatctgcattgaaagaagcagcggatggtgatgaatactctcttcttgtgaatttgaa 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taaatctgcattgaaagaagcagcggatggtgatgaatactctcttcttgtgaatttgaa 180
Query: 573 aaggttatatgagcttcagttatcaagggctgtacctatagagagtttgtatgatgatat 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaggttatatgagcttcagttatcaagggctgtacctatagagagtttgtatgatgatat 240
Query: 633 tgttagaattctccactatttcagaaatgtggatgatgaggttgtcagttttctgcttct 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgttagaattctccactatttcagaaatgtggatgatgaggttgtcagttttctgcttct 300
Query: 693 caacatgtatttgcatgttgcatggtctctgcagtcaattgtgaacagcgaaactgtctc 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caacatgtatttgcatgttgcatggtctctgcagtcaattgtgaacagcgaaactgtctc 360
Query: 753 tgaagcacagttgtcctctctactttcaaaacgcaatgtcttgtttgaggaacttgagta 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgaagcacagttgtcctctctactttcaaaacgcaatgtcttgtttgaggaacttgagta 420
Query: 813 ctttcttattaccccttccaatgaagagagagttagtaaatatgctaatcagctagcttg 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctttcttattaccccttccaatgaagagagagttagtaaatatgctaatcagctagcttg 480
Query: 873 cagagtctgtattatacttgcagaagcatggtgtttgttcagacagacaaatttttcttc 932
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 481 cagagtctgtattatacttgcagaagcatggtgtttgttcagacagactaaattttcttc 540
Query: 933 aacaaagctggaaagcttaggatattgtcccgatacctctgttcttcaaaaattctggag 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aacaaagctggaaagcttaggatattgtcccgatacctctgttcttcaaaaattctggag 600
Query: 993 -actttctgaacagcagctcaac-atttcagatgagaccgaagat 1035
|||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 601 tactttctgaacagcagctcaactatttcagatgagaccgaagat 645