Jatropha Genome Database
- JcCA0299021.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0299021.10 + phase: 0
(1014 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02418 924 0.0
>KJC_c02418
Length = 888
Score = 924 bits (466), Expect = 0.0
Identities = 466/466 (100%)
Strand = Plus / Minus
Query: 467 aggttagagaaattgtttcagttctggatattgatgttctattttatccttgccccaaaa 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aggttagagaaattgtttcagttctggatattgatgttctattttatccttgccccaaaa 564
Query: 527 atggtccaactttccgccccaaagttgttcagatgggtggaaaacagcagttcccttaca 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atggtccaactttccgccccaaagttgttcagatgggtggaaaacagcagttcccttaca 504
Query: 587 tggtggatccaaatactggaactgcaatgtatgaatcagatgacataatcaagtatctgg 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tggtggatccaaatactggaactgcaatgtatgaatcagatgacataatcaagtatctgg 444
Query: 647 ttgagaaatatggtgatggaactgttcctttcatgctgtcacttggtcttttaacaactt 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttgagaaatatggtgatggaactgttcctttcatgctgtcacttggtcttttaacaactt 384
Query: 707 tgactgaagggtttgctatgattggccgtatgggaaaggggtcatcttatactccatcga 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgactgaagggtttgctatgattggccgtatgggaaaggggtcatcttatactccatcga 324
Query: 767 aactaccacccaaaccacttgaaatatggtcctatgagggttccccattctgcaaaattg 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aactaccacccaaaccacttgaaatatggtcctatgagggttccccattctgcaaaattg 264
Query: 827 tccgtgaagcacttgttgaatcagaattaccacatattcagcgcagttgtgctcgtggca 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tccgtgaagcacttgttgaatcagaattaccacatattcagcgcagttgtgctcgtggca 204
Query: 887 gcccaaaacgacaggctctatatgaaaaagctggacactttcaggt 932
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gcccaaaacgacaggctctatatgaaaaagctggacactttcaggt 158
Score = 474 bits (239), Expect = e-133
Identities = 249/251 (99%), Gaps = 1/251 (0%)
Strand = Plus / Minus
Query: 180 caagccgccagagcccaagccgttcgcaatcaagtccggccagtttctgaacattcttgg 239
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 888 caagccgccagagcccaagccgtccgcaatcaagtccggccagtttctgaacattcttgg 829
Query: 240 tgctgctcccgccttgtttttccggttgggcactggtgttttcgttaatgggtattctgc 299
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 828 tgctgctcccgccttgtttt-ccggttgggcactggtgttttcgttaatgggtattctgc 770
Query: 300 gtcttttgtttccaagaatgagattccacctggccaatatgctctagaagtagctggtta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 gtcttttgtttccaagaatgagattccacctggccaatatgctctagaagtagctggtta 710
Query: 360 caaggtgaaggagagctcaaaagtaggccctcggcctgagaagcctattgagatatatga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 caaggtgaaggagagctcaaaagtaggccctcggcctgagaagcctattgagatatatga 650
Query: 420 gtttgaaagct 430
|||||||||||
Sbjct: 649 gtttgaaagct 639