Jatropha Genome Database
- JcCA0296741.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0296741.10 + phase: 0
(369 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03112 634 0.0
KJC_s15301 577 e-165
>KJC_c03112
Length = 745
Score = 634 bits (320), Expect = 0.0
Identities = 357/369 (96%), Gaps = 9/369 (2%)
Strand = Plus / Minus
Query: 1 atgggaggcaaatgtccgagccggaaagtgaagaagagaagatactctcacaagacggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 atgggaggcaaatgtccgagccggaaagtgaagaagagaagatactctcacaagacggct 641
Query: 61 cgccgctccaagttcctcttgttgttttggttacgtgacgatgcggtgtatgaggagctg 120
|||||||||||||||||| ||| | ||||||||||||||||||||||||||
Sbjct: 640 cgccgctccaagttcctc-----gttaaag----gtgacgatgcggtgtatgaggagctg 590
Query: 121 caaaagcctgatgtggagaagaagtccttgcctctagacgaggacttgcctggcatgggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 caaaagcctgatgtggagaagaagtccttgcctctagacgaggacttgcctggcatgggc 530
Query: 181 caatattattgcttgcactgcgaccgatactttgctaatgtgactgtgagggacgagcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 caatattattgcttgcactgcgaccgatactttgctaatgtgactgtgagggacgagcat 470
Query: 241 ttcaagaccaaacgccacagaaagcgtttgaagcaaatgatgggacctgcaccgcacact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ttcaagaccaaacgccacagaaagcgtttgaagcaaatgatgggacctgcaccgcacact 410
Query: 301 caacttgatgctgacttagctggtgggatgggtatgccagataatggtcctaagcttatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 caacttgatgctgacttagctggtgggatgggtatgccagataatggtcctaagcttatg 350
Query: 361 tcgatgtga 369
|||||||||
Sbjct: 349 tcgatgtga 341
>KJC_s15301
Length = 407
Score = 577 bits (291), Expect = e-165
Identities = 291/291 (100%)
Strand = Plus / Plus
Query: 79 ttgttgttttggttacgtgacgatgcggtgtatgaggagctgcaaaagcctgatgtggag 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 ttgttgttttggttacgtgacgatgcggtgtatgaggagctgcaaaagcctgatgtggag 139
Query: 139 aagaagtccttgcctctagacgaggacttgcctggcatgggccaatattattgcttgcac 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 aagaagtccttgcctctagacgaggacttgcctggcatgggccaatattattgcttgcac 199
Query: 199 tgcgaccgatactttgctaatgtgactgtgagggacgagcatttcaagaccaaacgccac 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tgcgaccgatactttgctaatgtgactgtgagggacgagcatttcaagaccaaacgccac 259
Query: 259 agaaagcgtttgaagcaaatgatgggacctgcaccgcacactcaacttgatgctgactta 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agaaagcgtttgaagcaaatgatgggacctgcaccgcacactcaacttgatgctgactta 319
Query: 319 gctggtgggatgggtatgccagataatggtcctaagcttatgtcgatgtga 369
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gctggtgggatgggtatgccagataatggtcctaagcttatgtcgatgtga 370