Jatropha Genome Database

JcCA0296331.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0296331.10 + phase: 0 /partial
         (591 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05983                                                            450   e-126

>KJC_c05983 
          Length = 690

 Score =  450 bits (227), Expect = e-126
 Identities = 227/227 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtgtgcttcttgccaggtacacttgctcttggtgccacaaagggcatcacaaaggaaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gtgtgcttcttgccaggtacacttgctcttggtgccacaaagggcatcacaaaggaaaag 168

                                                                       
Query: 61  gcgatgaaagctaatctgctcaaatttgaagaccttgaaaatttaaagctcgctgaagat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gcgatgaaagctaatctgctcaaatttgaagaccttgaaaatttaaagctcgctgaagat 108

                                                                       
Query: 121 ttagcaaagacatgttttgaaatgtattcagttacttctactggtttggccccagaaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 ttagcaaagacatgttttgaaatgtattcagttacttctactggtttggccccagaaatt 48

                                                          
Query: 181 gcttactttcataccaaggagtattctgaagctgggcttaatggtgg 227
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47  gcttactttcataccaaggagtattctgaagctgggcttaatggtgg 1