Jatropha Genome Database
- JcCA0294271.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0294271.10 + phase: 1 /pseudo/partial
(690 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03317 1215 0.0
>KJC_c03317
Length = 1491
Score = 1215 bits (613), Expect = 0.0
Identities = 637/641 (99%), Gaps = 3/641 (0%)
Strand = Plus / Minus
Query: 52 aagaaacctaaccaaccttcttttgtcttacctaccagatctgtccttcacatctccgcc 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1491 aagaaacctaaccaaccttcttttgtcttacctaccagatctgtccttcacatctccgcc 1432
Query: 112 gtccattccgccgatccttcaaagaatccgattgtccctgacaaaaa-caacagaatgcg 170
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1431 gtccattccgccgatccttcaaagaatccgattgtccctgacaaaaaacaacagaatgcg 1372
Query: 171 aaaactt-ctacagcagctgccgcggcaacggcggcggcggcgccgacaacaatcaatgt 229
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1371 aaaacttactacagcagctgccgcggcaacggcggcggcggcgccgacaacaatcaatgt 1312
Query: 230 ggttcctgggaaatggagcgtcgacagctggaagtcaaagaaggctctgcagttaccgga 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1311 ggttcctgggaaatggagcgtcgacagctggaagtcaaagaaggctctgcagttaccgga 1252
Query: 290 atacccgagcaaggaggaccttgaaacggtgctcaagactctcgaggctttccctccgat 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 atacccgagcaaggaggaccttgaaacggtgctcaagactctcgaggctttccctccgat 1192
Query: 350 tgtgtttgccggtgaggctaggagcttggaggagaagcttgctgaggctgcaatgggaaa 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 tgtgtttgccggtgaggctaggagcttggaggagaagcttgctgaggctgcaatgggaaa 1132
Query: 410 tgcttttctattacaagggggagattgtgcagagagtttcaaggagtttaacgccaataa 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 tgcttttctattacaagggggagattgtgcagagagtttcaaggagtttaacgccaataa 1072
Query: 470 tatccgtgacactttcaggattctcctccagatgggtgctgttttgatgtttggtggcca 529
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 tatccgtgacactttca-gattctcctccagatgggtgctgttttgatgtttggtggcca 1013
Query: 530 aatgcccgttatcaaggtgggaaggatggcgggtcagtttgcgaagccaagatcggagcc 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 aatgcccgttatcaaggtgggaaggatggcgggtcagtttgcgaagccaagatcggagcc 953
Query: 590 ttttgaggaaaagaatggagtgaagttgcctagttaccgaggggacaacataaatggaga 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 ttttgaggaaaagaatggagtgaagttgcctagttaccgaggggacaacataaatggaga 893
Query: 650 tgctgtcaatgagaagtcgagagttcctgatccggaaagga 690
|||| ||||||||||||||||||||||||||||||||||||
Sbjct: 892 tgctttcaatgagaagtcgagagttcctgatccggaaagga 852