Jatropha Genome Database

JcCA0291681.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0291681.10 - phase: 0 
         (1188 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c07540                                                            930   0.0  

>KJC_c07540 
          Length = 498

 Score =  930 bits (469), Expect = 0.0
 Identities = 497/501 (99%), Gaps = 4/501 (0%)
 Strand = Plus / Minus

                                                                       
Query: 365 tacactgtaatcaacaaccgccgtcggttttg-aaggttgagcttaagtacttcattttg 423
           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 498 tacactgtaatcaacaaccgccgtcggttttgtaaggttgagcttaagtacttcattt-g 440

                                                                       
Query: 424 tccattttggatgatccgattgtcagtcgggtactcggtgaggctgggtttaggagttgt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tccattttggatgatccgattgtcagtcgggtactcggtgaggctgggtttaggagttgt 380

                                                                       
Query: 484 gatattaagttggccattattcacccgccggtgacgccgcaagcggcgaaattctcgcgg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gatattaagttggccattattcacccgccggtgacgccgcaagcggcgaaattctcgcgg 320

                                                                       
Query: 544 acaaggtatccgccgcttttcctgtataatttgacaggttcggatccagttcaacccggt 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 acaaggtatccgccgcttttcctgtataatttgacaggttcggatccagttcaacccggt 260

                                                                       
Query: 604 ttgagctttccctttagtggacgagaagatgtggatgaggattgtaggagagtcagtgag 663
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttgagctt-ccctttagtggacgagaagatgtggatgaggattgtaggagagtcagtgag 201

                                                                       
Query: 664 gccttaatgaaaagaaatggaagaggaaaaaacttgttgcttcttggtgtctgtgctggt 723
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gccttaatgaaaagaaatggaagaggaaaaaacttgttgcttcttggtgtctgtgctggt 141

                                                                       
Query: 724 gatgctttgaatagatttatcgaatgtgtaaatatggataaagaaaaaattttgcctagt 783
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gatgctttgaatagatttatcgaatgtgtaaatatggataaagaaaaaattttgcctagt 81

                                                                       
Query: 784 gagatttcagggctaagagtgatttctatagaaaaagagattgttgagtttgtcagtgaa 843
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 80  gagatttcagggctaagagtgatttctatag-aaaagagattgttgagtttgtcagtgaa 22

                                
Query: 844 ggagggaaagaaagagaaaag 864
           |||||||||||||||||||||
Sbjct: 21  ggagggaaagaaagagaaaag 1