Jatropha Genome Database
- JcCA0291601.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0291601.10 + phase: 0
(1392 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02375 1520 0.0
KJC_c12111 500 e-141
KJC_c02353 96 3e-19
KJC_c03284 82 4e-15
>KJC_c02375
Length = 781
Score = 1520 bits (767), Expect = 0.0
Identities = 774/775 (99%), Gaps = 1/775 (0%)
Strand = Plus / Plus
Query: 281 ctaataattatgccacatttgatctcaataagatcttggtagatgaaggggaagaagaga 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 ctaataattatgccacatttgatctcaataagatcttggtagatgaaggggaagaagaga 67
Query: 341 agcgggatccgaacaaaccgtacagtctcggccccaagatttcggattgggatgagcaga 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 agcgggatccgaacaaaccgtacagtctcggccccaagatttcggattgggatgagcaga 127
Query: 401 gagctgaatggttgaggaacaaccctaatttccctaattttattggaccaaacaagccga 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gagctgaatggttgaggaacaaccctaatttccctaattttattggaccaaacaagccga 187
Query: 461 gagtgctattggtgacgggatcttcacctaaaccatgtgagaatcctgtcggggatcatt 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gagtgctattggtgacgggatcttcacctaaaccatgtgagaatcctgtcggggatcatt 247
Query: 521 acttgttgaagtccattaagaacaagatcgactactgtaggcttcatgggattgagattt 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 acttgttgaagtccattaagaacaagatcgactactgtaggcttcatgggattgagattt 307
Query: 581 tttataacatggctttgctcgatgcggaaatggctggcttttgggcgaagcttccattga 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tttataacatggctttgctcgatgcggaaatggctggcttttgggcgaagcttccattga 367
Query: 641 taaggaagctattgctttcgcatccggagattgagttcttgtggtggatggatagtgatg 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 taaggaagctattgctttcgcatccggagattgagttcttgtggtggatggatagtgatg 427
Query: 701 ccatgtttacagatatggcttttgaggttccatgggagaggtacaaagattccaactttg 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ccatgtttacagatatggcttttgaggttccatgggagaggtacaaagattccaactttg 487
Query: 761 tgatgcacggttggaatgaaatggtttatgatcagaaaaactggattggattaaatactg 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tgatgcacggttggaatgaaatggtttatgatcagaaaaactggattggattaaatactg 547
Query: 821 gtagttttctgttgaggaatggccaatgggcgttggatattttggatgcttgggcaccaa 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gtagttttctgttgaggaatggccaatgggcgttggatattttggatgcttgggcaccaa 607
Query: 881 tggggcccaaagggaagattagagatgaagctgggaaagtactcaccagggagcttaaag 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tggggcccaaagggaagattagagatgaagctgggaaagtactcaccagggagcttaaag 667
Query: 941 atagacctgttttcgaagctgatgatcagtctgcaatggtttatctactggctacacaaa 1000
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 atagacctg-tttcgaagctgatgatcagtctgcaatggtttatctactggctacacaaa 726
Query: 1001 gggataagtggggtgataaggtttatctagagagtgcttattatttgcacggtta 1055
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 gggataagtggggtgataaggtttatctagagagtgcttattatttgcacggtta 781
>KJC_c12111
Length = 284
Score = 500 bits (252), Expect = e-141
Identities = 252/252 (100%)
Strand = Plus / Plus
Query: 1 atgctggagcggtgtctcgggactcaccgagtccttcgtattcagagagcaattcgccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 atgctggagcggtgtctcgggactcaccgagtccttcgtattcagagagcaattcgccat 92
Query: 61 gctaaagttaccctcttttgcctctttatgaccgtcgtcgtcctacgtggcaccatcggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 gctaaagttaccctcttttgcctctttatgaccgtcgtcgtcctacgtggcaccatcggc 152
Query: 121 gccggcaagtttggcacgccggagcaggacttcaatgacctccgcgaccgcttctacgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gccggcaagtttggcacgccggagcaggacttcaatgacctccgcgaccgcttctacgct 212
Query: 181 tcgcgcaaacacgctgagcctcacagagtcctcgtagaagcccaagtcgctaccgaatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tcgcgcaaacacgctgagcctcacagagtcctcgtagaagcccaagtcgctaccgaatca 272
Query: 241 gctcaaagtagc 252
||||||||||||
Sbjct: 273 gctcaaagtagc 284
>KJC_c02353
Length = 682
Score = 95.6 bits (48), Expect = 3e-19
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 1039 tattatttgcacggttattggggtattttggttgatcgatatgaggaaatgattgagaat 1098
||||||||||| |||||||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 593 tattatttgcatggttattgggcaggtttggtggatcggtatgaggaaatgattgagaag 534
Query: 1099 taccatccaggtctgggtgatcaccggtggccacttgtgactcactttgtgggttgcaag 1158
||||||||||| |||||||| | ||||||| ||||||| || || || |||||||||
Sbjct: 533 taccatccaggattgggtgatgagaggtggccttttgtgacacatttcgtcggttgcaag 474
Query: 1159 ccatgtgg 1166
|| |||||
Sbjct: 473 ccttgtgg 466
>KJC_c03284
Length = 720
Score = 81.8 bits (41), Expect = 4e-15
Identities = 89/105 (84%)
Strand = Plus / Plus
Query: 490 aaaccatgtgagaatcctgtcggggatcattacttgttgaagtccattaagaacaagatc 549
||||||||||| || || | ||||||||||| |||||||| | || ||||| ||||||
Sbjct: 511 aaaccatgtgataacccgattggggatcattatctgttgaaggcgataaagaataagatc 570
Query: 550 gactactgtaggcttcatgggattgagattttttataacatggct 594
|| || |||||| ||||||||||||||||| ||||||| ||||||
Sbjct: 571 gattattgtaggattcatgggattgagattgtttataatatggct 615