Jatropha Genome Database
- JcCA0291241.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0291241.20 - phase: 0 /pseudo/partial
(1272 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c12768 1275 0.0
>KJC_c12768
Length = 676
Score = 1275 bits (643), Expect = 0.0
Identities = 670/676 (99%), Gaps = 6/676 (0%)
Strand = Plus / Plus
Query: 114 ccgagttcttcgattggttaaaacaaactaggaggaaattgcacgagtatccagaattgg 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgagttcttcgattggttaaaacaaactaggaggaaattgcacgagtatccagaattgg 60
Query: 174 ccttcgaagagtacaacacgagtcaagtcataagatcggaactcgactcactcggaatag 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccttcgaagagtacaacacgagtcaagtcataagatcggaactcgactcactcggaatag 120
Query: 234 agtataaatggcctattgcgaagactgggttggttggttcgattgggtcaggggtccagc 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtataaatggcctattgcgaagactgggttggttggttcgattgggtcaggggtccagc 180
Query: 294 catggttcggtcttagagcagatatggacgctctccctattcag----agtgggagcaca 349
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 catggttcggtcttagagcagatatggacgctctccctattcaggttgagtgggagcaca 240
Query: 350 agagcaagatcaatggccaaatgcatgcttgtggccatgatgctcacgttacaatgctgc 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agagcaagatcaatggccaaatgcatgcttgtggccatgatgctcacgttacaatgctgc 300
Query: 410 ttggagcagctaagttacttcaacgcaagaaagataagttaaagggtactgttaagcttg 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttggagcagctaagttacttcaacgcaagaaagataagttaaagggtactgttaagcttg 360
Query: 470 tcttccaacctggggaagaagggcatgccggtgcttaccatatgttgaaagaaggagccc 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcttccaacctggggaagaagggcatgccggtgcttaccatatgttgaaagaaggagccc 420
Query: 530 ttgataacttccaagccatttttggtctccacgttgcaccagatatgcctgttggttcaa 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgataacttccaagccatttttggtctccacgttgcaccagatatgcctgttggttcaa 480
Query: 590 ttgcttctaaacctggtgtaatggctgctgcatctgcaagg-ttttcagttgtcattaag 648
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 481 ttgcttctaaacctggtgtaatggctgctgcatctgcaaggtttttcagttgtcattaag 540
Query: 649 gggaagggtggacatgctgcgcggcctcaagatacaagagatccagttcttgctgcttcc 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gggaagggtggacatgctgcgcggcctcaagatacaagagatccagttcttgctgcttcc 600
Query: 709 tttgccat-ccttgcacttcaacacttaatttctcgagagaaagatcctctcgagccgag 767
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttgccatcccttgcacttcaacacttaatttctcgagagaaagatcctctcgagccgag 660
Query: 768 ggtactgtcagtgggg 783
||||||||||||||||
Sbjct: 661 ggtactgtcagtgggg 676