Jatropha Genome Database

JcCA0290791.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0290791.10 + phase: 1 /partial
         (1178 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c12768                                                             54   8e-07

>KJC_c12768 
          Length = 676

 Score = 54.0 bits (27), Expect = 8e-07
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 292 aaatgcatgcctgtggccatgatggacatgtcgcaatgcttcttggagcagctaa 346
           |||||||||| |||||||||||||  || ||  ||||||| ||||||||||||||
Sbjct: 259 aaatgcatgcttgtggccatgatgctcacgttacaatgctgcttggagcagctaa 313