Jatropha Genome Database
- JcCA0290181.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0290181.10 - phase: 2 /partial
(1792 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00326 2440 0.0
KJC_c00560 1041 0.0
KJC_s13643 270 1e-71
KJC_c12791 240 1e-62
KJC_c00126 100 2e-20
>KJC_c00326
Length = 1465
Score = 2440 bits (1231), Expect = 0.0
Identities = 1231/1231 (100%)
Strand = Plus / Plus
Query: 562 agcagcagctgcaacatcttcatcttcttctactattagtggcgtttccgtttctggttc 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcagcagctgcaacatcttcatcttcttctactattagtggcgtttccgtttctggttc 60
Query: 622 tggctctgtttcttttggtgtgtcaactgagtcaactcgtccagtggtcctagtggactc 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggctctgtttcttttggtgtgtcaactgagtcaactcgtccagtggtcctagtggactc 120
Query: 682 gcaagaaaacggaatccgactcgttcatcttctaatggcttgtgcagaagctgttcaaga 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaagaaaacggaatccgactcgttcatcttctaatggcttgtgcagaagctgttcaaga 180
Query: 742 taataacctaactctagccgaagctttagtaaagcaaatcggtttcttggctgcttctca 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taataacctaactctagccgaagctttagtaaagcaaatcggtttcttggctgcttctca 240
Query: 802 agccggagcgatgcgtaaggtggccacctacttcgccgaggccttggctcgaagaatcta 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agccggagcgatgcgtaaggtggccacctacttcgccgaggccttggctcgaagaatcta 300
Query: 862 tagactctacccaccaagtccagtagaccattccttatccgatattcttcagatgcactt 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagactctacccaccaagtccagtagaccattccttatccgatattcttcagatgcactt 360
Query: 922 ctacgaaacttgcccatatctcaaattcgctcatttcactgcaaatcaagcaatccttga 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctacgaaacttgcccatatctcaaattcgctcatttcactgcaaatcaagcaatccttga 420
Query: 982 agcttttgaagggaaaaagcgagtccatgtcatcgatttctccatgaatgaaggtatgca 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agcttttgaagggaaaaagcgagtccatgtcatcgatttctccatgaatgaaggtatgca 480
Query: 1042 atggcctgctttattacaagctcttgctcttagacctggtggcccgccagctttccggtt 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atggcctgctttattacaagctcttgctcttagacctggtggcccgccagctttccggtt 540
Query: 1102 aaccggaattggacctccttcgcatgatgattccgatcaccttcaagaagtagggtggaa 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaccggaattggacctccttcgcatgatgattccgatcaccttcaagaagtagggtggaa 600
Query: 1162 attggctcagttagcggagacgattcatgttgagtttgaatatagaggattcgtagctaa 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attggctcagttagcggagacgattcatgttgagtttgaatatagaggattcgtagctaa 660
Query: 1222 tagtttagcagatctcgacgcgtctatgcttgaacttaggcccaatgagtttgagtctct 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tagtttagcagatctcgacgcgtctatgcttgaacttaggcccaatgagtttgagtctct 720
Query: 1282 cgcggttaactcagtcttcgagttacataaattgttagccagaccaggcgccattgagaa 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgcggttaactcagtcttcgagttacataaattgttagccagaccaggcgccattgagaa 780
Query: 1342 agttctttcagtagtgaaacagatgaaaccggagattgttactattgttgaacaagaagc 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 agttctttcagtagtgaaacagatgaaaccggagattgttactattgttgaacaagaagc 840
Query: 1402 gaaccataatggtccggttttcttagaccgatttactgagtcattgcattattactcgac 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gaaccataatggtccggttttcttagaccgatttactgagtcattgcattattactcgac 900
Query: 1462 tctgtttgactcgttagaaggatcggcgagtactcaagataaggtgatgtctgaggtgta 1521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tctgtttgactcgttagaaggatcggcgagtactcaagataaggtgatgtctgaggtgta 960
Query: 1522 cttaggtaaacaaatttgcaatgttgtggcatgtgaaggggcagaccgagttgagagaca 1581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cttaggtaaacaaatttgcaatgttgtggcatgtgaaggggcagaccgagttgagagaca 1020
Query: 1582 cgagacattaactcagtggcgaactcggttgggctcatcagggtttgtgccggttcatct 1641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 cgagacattaactcagtggcgaactcggttgggctcatcagggtttgtgccggttcatct 1080
Query: 1642 cgggtccaatgcgtttaagcaagcaagcatgttactggccttatttgccggcggagatgg 1701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cgggtccaatgcgtttaagcaagcaagcatgttactggccttatttgccggcggagatgg 1140
Query: 1702 gtatagagtggaagagaataatgggtgtttgacgctgggttggcatactcggccactcat 1761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gtatagagtggaagagaataatgggtgtttgacgctgggttggcatactcggccactcat 1200
Query: 1762 tgcaacatcggcatggcgggtcgtcaacaaa 1792
|||||||||||||||||||||||||||||||
Sbjct: 1201 tgcaacatcggcatggcgggtcgtcaacaaa 1231
>KJC_c00560
Length = 757
Score = 1041 bits (525), Expect = 0.0
Identities = 525/525 (100%)
Strand = Plus / Minus
Query: 1 catggcggctacatcggcggcgcctgatactagttgtaaaagcaagatatgggaagacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 catggcggctacatcggcggcgcctgatactagttgtaaaagcaagatatgggaagacga 489
Query: 61 agcacaaggtgatggtggaatggatgagcttttagctgttttgggttataaggtaaggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 agcacaaggtgatggtggaatggatgagcttttagctgttttgggttataaggtaaggtc 429
Query: 121 atccgacatggcagaagtagctcaaaagcttgaacaacttgaagaagttatgtgtaatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 atccgacatggcagaagtagctcaaaagcttgaacaacttgaagaagttatgtgtaatgt 369
Query: 181 acaggaagatggactttctcatctttcttctgaaactgttcattataatccttctgatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 acaggaagatggactttctcatctttcttctgaaactgttcattataatccttctgatat 309
Query: 241 atctacatggcttgaaagtatgttatctgagcttaatcctaatcctaatttcgatccaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 atctacatggcttgaaagtatgttatctgagcttaatcctaatcctaatttcgatccaca 249
Query: 301 accttctttaaatgattcattttttgctgctcctgaatcttccactgtcacctctatcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 accttctttaaatgattcattttttgctgctcctgaatcttccactgtcacctctatcga 189
Query: 361 ttttgccgaacaacagaaatcaaacaagcatgccagtggagtaatggcttttgaagaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttttgccgaacaacagaaatcaaacaagcatgccagtggagtaatggcttttgaagaatc 129
Query: 421 ttcttctgattacgatcttaaagctattcctggtaaggctgtttttgctcgatctcatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ttcttctgattacgatcttaaagctattcctggtaaggctgtttttgctcgatctcatca 69
Query: 481 aatcgattcctcttcttcttctcctcgagatcccaaacgcttgaa 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 aatcgattcctcttcttcttctcctcgagatcccaaacgcttgaa 24
>KJC_s13643
Length = 402
Score = 270 bits (136), Expect = 1e-71
Identities = 145/147 (98%), Gaps = 2/147 (1%)
Strand = Plus / Plus
Query: 1 catggcggctacatcggcggcgcctgatactagttgtaaaagcaagatatgggaagacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 catggcggctacatcggcggcgcctgatactagttgtaaaagcaagatatgggaagacga 174
Query: 61 agcacaaggtgatggtggaatggatgagcttttagctgttttgggttataaggtaaggtc 120
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 175 agcacaaggtgatggtggaatggatgagcttttagctgttt--ggttataaggtaaggtc 232
Query: 121 atccgacatggcagaagtagctcaaaa 147
|||||||||||||||||||||||||||
Sbjct: 233 atccgacatggcagaagtagctcaaaa 259
Score = 163 bits (82), Expect = 2e-39
Identities = 103/106 (97%), Gaps = 3/106 (2%)
Strand = Plus / Plus
Query: 91 tttagctgttttgggttataaggtaaggtcatccgacatggcagaagtagctc-aaaagc 149
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 298 tttagctgttt-gggttataaggtaaggtcatccgacatggcagaagtagctcaaaaagc 356
Query: 150 ttgaac-aacttgaagaagttatgtgtaatgtacaggaagatggac 194
|||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ttgaacaaacttgaagaagttatgtgtaatgtacaggaagatggac 402
Score = 75.8 bits (38), Expect = 3e-13
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 60 aagcacaaggtgatggtggaatggatgagcttttagct 97
||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aagcacaaggtgatggtggaatggatgagcttttagct 262
>KJC_c12791
Length = 195
Score = 240 bits (121), Expect = 1e-62
Identities = 128/129 (99%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 1512 ctgaggtgtacttaggtaaacaaatttgcaatgttgtggcatgtgaaggggcagaccgag 1571
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgaggtgtacttaggtaa-caaatttgcaatgttgtggcatgtgaaggggcagaccgag 59
Query: 1572 ttgagagacacgagacattaactcagtggcgaactcggttgggctcatcagggtttgtgc 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 ttgagagacacgagacattaactcagtggcgaactcggttgggctcatcagggtttgtgc 119
Query: 1632 cggttcatc 1640
|||||||||
Sbjct: 120 cggttcatc 128
>KJC_c00126
Length = 2049
Score = 99.6 bits (50), Expect = 2e-20
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 1376 attgttactattgttgaacaagaagcgaaccataatggtccggttttcttagaccgattt 1435
||||| || ||||||||||||||||| ||||| || ||||||||||| |||||||| |||
Sbjct: 596 attgtaaccattgttgaacaagaagcaaaccacaacggtccggtttttttagaccggttt 537
Query: 1436 actgagtcattgcattattactcgactctgtttgactcgttagaaggatc 1485
||||| | |||||||| || |||| | ||||||||||||| ||||||||
Sbjct: 536 actgaagcgttgcattactattcgagtttgtttgactcgttggaaggatc 487
Score = 75.8 bits (38), Expect = 3e-13
Identities = 98/118 (83%)
Strand = Plus / Minus
Query: 117 ggtcatccgacatggcagaagtagctcaaaagcttgaacaacttgaagaagttatgtgta 176
||||||| |||||||| || || ||||||||||||||||||||||| || ||| |||
Sbjct: 1795 ggtcatcggacatggccgacgttgctcaaaagcttgaacaacttgagatggtaatgggta 1736
Query: 177 atgtacaggaagatggactttctcatctttcttctgaaactgttcattataatccttc 234
| || |||||||| |||||||||||||| |||| ||||| ||||||||||||||
Sbjct: 1735 cagctcaagaagatgggatttctcatctttctactgatactgtacattataatccttc 1678
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 912 agatgcacttctacgaaacttgcccatatctcaaattcgctcatttcactgcaaatcaag 971
||||||| ||||||||||| || || || |||||||||||||||||||| || |||||||
Sbjct: 1057 agatgcatttctacgaaacctgtccttacctcaaattcgctcatttcacagctaatcaag 998
Query: 972 c 972
|
Sbjct: 997 c 997